Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02047 ATGGCGTTTTGGAGATCTCTCGCCTTCTCTGCGGTTCTTCTGCTTCTGATCCATGCCTCTCACTGCTTCTATCTCCCCGGCGTCGCACCACAGGACTTCCAGAAGGGAGACCAATTGCAAGTGAAAGTAAATAAATTAACGTCAACAAAGACCCAGCTTCCATATTCATATTATTCACTTCCTTATTGCGGCCCAGAAAAAATACAGGACAGTGCAGAAAATCTTGGAGAAGTGCTTCGTGGTGATCGCATTGAAAATTCTCTTTATGCGTTTAAAATGCGCGAGCCACAAATGTGCAATATTGTGTGTAATCTTAAACTTGATGCCAAAACTACCAAGGAGTTCAAAGAGAAGATCAGTGACGAGTATAGGGTGAACATGATTCTTGATAACCTTCCCCTAGTTGTTCCCTTGAAACGAAATGATCAGGATTCTACTGTTTATCAGCTGGGTTTCCATGTTGGACTCAAAGGGCAGTACAGTGGGAGCAAGGAGGAGAAGTATTTTATTCACAACCATTTAGCATTTACTGTCAAGTACCATAAAGACGTCCTAACTGAATCTGCTAGAATAGTGGGCTTTGAGGTTAAGCCATTCAGTGCTAAACATGAATACGAAGGTAAATGGGAAGAAAAAACAACTCGTTTAACAACCTGTGACCCTCATGCTAAAAGCACAGTTGTCAACTCCAACTCTCCCCAAGAGGTTGAAGAGGGCAAGGAAATTATCTTCACCTATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCATCAAGATGGGATGCCTATTTGCTAATGAATGATGATCAAATCCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTTCTTTCGGGGATGGTGGCAATGATAATGCTGCGTACACTATACCGTGACATTGCGAAATATAACGAGCTTGAGACCCAAGAAGAAGCCCAGGAGGAGACTGGTTGGAAGCTTGTCCACGGTGATGTGTTTAGGCCTCCTACTAACTCAGATTTGCTGTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGCATGATGCTGGTAACTATGATGTTTGCTGTCCTTGGATTCCTTTCACCTTCAAACCGAGGTGGGCTGATGACAGCCATGCTCTTGCTTTGGGTTTTCATGGGAATATTTGCCGGTTACGCATCAACTCGTCTGTACAAAATGTTCAAAGGATCGGAGTGGAAAAAAGTTGCCCTCAGAACTGCAACCATGTTCCCTGCCATTGTCTCTGCCATTTTCTTTGTTCTAAATGCTCTCATATGGGGCCAAAAATCATCTGGAGCTGTGCCATTTGGTACAATGTTTGCTCTGATCTTTTTATGGTTTGGAATCTCGGTTCCGCTTGTTTTTGTGGGTAGCTATGTCGGATTCAAGAAGCCTGCGATTGAGAATCCTGTGAAAACGAACAAGATCCCTAGGCAGATCCCTGAGCAGGCTTGGTACATGAACCCAGTTTTCTCAGTTTTGATTGGTGGAATACTCCCGTTCGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACATCAATCTGGTTGAATCAGTTTTACTACATCTTCGGATTCCTCTTTTTGGTCTTCATCATCCTCATCGTGACTTGTGCGGAAATAACCATTGTGCTTTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCATATCTTACCTCTGGTTCCTCTGCTCTTTACCTCTTTCTTTACGCAACTTTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGCGATATTTTACTTTGGGTACATGCTCATAGCTTCTTATGCATTTTTTGTGGTGACCGGTACAATCGGATTTTATGCATGCTTTTGGTTCACTAGGCTCATCTACTCCTCCGTCAAAATTGATTAG 1911 0.4286 MAFWRSLAFSAVLLLLIHASHCFYLPGVAPQDFQKGDQLQVKVNKLTSTKTQLPYSYYSLPYCGPEKIQDSAENLGEVLRGDRIENSLYAFKMREPQMCNIVCNLKLDAKTTKEFKEKISDEYRVNMILDNLPLVVPLKRNDQDSTVYQLGFHVGLKGQYSGSKEEKYFIHNHLAFTVKYHKDVLTESARIVGFEVKPFSAKHEYEGKWEEKTTRLTTCDPHAKSTVVNSNSPQEVEEGKEIIFTYDVEFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDIAKYNELETQEEAQEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMMFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYASTRLYKMFKGSEWKKVALRTATMFPAIVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAIFYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02047 636 SUPERFAMILY MFS general substrate transporter 275 460 IPR036259 -
Vian4g02047 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 22 636 IPR004240 GO:0016020
Vian4g02047 636 Pfam Endomembrane protein 70 54 592 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02047 Vian-Chr4 37294002 37297685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02047 8 636 Miscellaneous Gene Families AT5G10840 84.628 0.0 1101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02047 K17086 - gmx:100780976 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02047 4 37294002 37297685 Vian4g02047 4 37294002 37297685 ECH
Vian7g00523 7 12809794 12813313 Vian4g02047 4 37294002 37297685 PCT