Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00521 ATGAAGTTCATGAAGTTGGGTTCGAAGCCTGATGCTCTTCAAGCTGACGGAAAATCTGTCAGGTATATATCGTCTGAATTGGCTACAGATATTATCATAACTGTTGGTGAAGTGAAGTTTCACCTGCACAAGTTCCCTCTACTGTCCAAGAGTAATCGGTTACAAAAGATGCTGACAAAGGCTAATGAAGAGTGTTCTGATGAAATTCAATTGGATGATTTTCCTGGTGGTTCCAAGGCCTTCGAAATATGTGTAAAGTTCTGCTATGGAATGACTGTTACTCTCAATGCTTACAATGTTGTGGCTGCTCGTTGTGCAGCTGAGTACCTTGAAATGACTGAGGATATTGAGAAAGGGAACTTAGTTTTTAAAATTGAGGTGTTTCTTACCTCCAGTATATTTCGTAGTTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTTCTTCCATGGTCTGAGGACCTAAAGATAGTTGGCAGATGCATAGATTCCATTGCCTCTAAAACTTCTGTGGACCCAGCAAACATCACTTGGTCTTATACTTATAACAGGAAGTTATCAGAACTTGATAAAATTGTTGAGGACAAGACAGCACCACATGAGAAAATTGAGCCTGTTCCCAAGGATTGGTGGGTTGAAGATATATGTGAGCTTGACATTGATCTATATAAACGAGTTATGATTACAATCAAATCCAAGGGAAGAATGGATGGAGTTGTGATTGGTGAGGCACTAAAAATGTATGCTGTAAGATGGTTGCCTGATTCTGTTGATGCATTGGTTTCCGATGCTCATGCCCGGAGGAACAAATCTCTAGTAGAAACAATTGTCTGTCTATTGCCATGTGATAATGGCATGGGTTGTTCATGTAGTTTCTTGCTGAAGCTATTGAAAGTGGCCATATTAGTAGAAGCTGATGAGTCTTCAAGGGGACACTTGATGAAGAACATTGGCTTAAAATTGCATGAAGCTTCTGTCAGAGATTTACTGATTCCAGCAAGGCTTCCCCTAACCACCAAATTTGATATTGACCTGGTGCAAGATCTTTTGAATCTATACATGACTAACTTAAGGGGAAGCTGTGATATTGAGATTGAGGAGAAGAAGAAAGACAAAGCAAACGAGTCTATGTTAGGACAGAGGTCTTTATTGAATGTTGGCAAGTTGGTAGATGGCTATCTTGGAGAAGTTGCACATGATCCAAATCTTGGCCCTACTAGTTTTGTCGATATTTCACAGTCAATTCCAGATTTTGCCAGACCAAATCATGATGGTCTGTACAGAGCTATAGATATCTACTTGAAGGAGCACCCAGGTTTGACAAAAGCTGAAAGGAAGAAGATATGTAGTCTAATGGATGTTAAGAAGTTGACAGTGGATGCATCAATGCATGCTGCACAAAATGAGCGTCTTCCCCTTAGAGTGGTTGTGCAGGTTCTCTATTTCGAGCAGATCAGAGCCGCCTCCAACGGCCGGACACGTGGCAACAGTCCACGAGATTCCTCGAGCACTCTTGTGAATGGTGATGAGGAGTGTGTGAAAACTGGGGGAGAGATGTGTCAGTTGAAGATGAGAGACGAAGAGTTTCAGAAGAATGGGAAGCTGAACAAGAAGAGTAGCAAAAACAGCAGAAGTGGCATGCAGTTGCTGCCATCAAGATCAAGGAGAATCTTTGACAAGTTATGGATAGTTGGAAAAGGGCAAGGAGAGAACAGGAGTTCAGAGACTTCAGGGAGTTCTAACAGTCCAACATCTGTAGTCCCTGGAGACACAAAATCATCTGGTTCATCATTGAGACACAGGAGGCATTCTATCTCTTAA 1827 0.4143 MKFMKLGSKPDALQADGKSVRYISSELATDIIITVGEVKFHLHKFPLLSKSNRLQKMLTKANEECSDEIQLDDFPGGSKAFEICVKFCYGMTVTLNAYNVVAARCAAEYLEMTEDIEKGNLVFKIEVFLTSSIFRSWKDSIIVLQTTKSLLPWSEDLKIVGRCIDSIASKTSVDPANITWSYTYNRKLSELDKIVEDKTAPHEKIEPVPKDWWVEDICELDIDLYKRVMITIKSKGRMDGVVIGEALKMYAVRWLPDSVDALVSDAHARRNKSLVETIVCLLPCDNGMGCSCSFLLKLLKVAILVEADESSRGHLMKNIGLKLHEASVRDLLIPARLPLTTKFDIDLVQDLLNLYMTNLRGSCDIEIEEKKKDKANESMLGQRSLLNVGKLVDGYLGEVAHDPNLGPTSFVDISQSIPDFARPNHDGLYRAIDIYLKEHPGLTKAERKKICSLMDVKKLTVDASMHAAQNERLPLRVVVQVLYFEQIRAASNGRTRGNSPRDSSSTLVNGDEECVKTGGEMCQLKMRDEEFQKNGKLNKKSSKNSRSGMQLLPSRSRRIFDKLWIVGKGQGENRSSETSGSSNSPTSVVPGDTKSSGSSLRHRRHSIS 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00521 608 MobiDBLite consensus disorder prediction 492 511 - -
Vian7g00521 608 MobiDBLite consensus disorder prediction 569 608 - -
Vian7g00521 608 Pfam BTB/POZ domain 26 117 IPR000210 GO:0005515
Vian7g00521 608 SUPERFAMILY POZ domain 22 114 IPR011333 -
Vian7g00521 608 CDD BTB_POZ_NPY3-like 20 124 - -
Vian7g00521 608 Pfam NPH3 family 211 464 IPR027356 -
Vian7g00521 608 Gene3D Potassium Channel Kv1.1; Chain A 10 121 IPR011333 -
Vian7g00521 608 MobiDBLite consensus disorder prediction 492 512 - -
Vian7g00521 608 PANTHER OS12G0117600 PROTEIN 25 563 IPR043454 -
Vian7g00521 608 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Vian7g00521 608 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Vian7g00521 608 MobiDBLite consensus disorder prediction 571 596 - -
Vian7g00521 608 SMART BTB_4 29 127 IPR000210 GO:0005515
Vian7g00521 608 MobiDBLite consensus disorder prediction 533 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00521 Vian-Chr7 12771794 12775426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00521 22 523 EF-hand Containing Proteins AT3G44820 33.271 1.61e-93 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00521 - - gmx:100809437 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00521 7 12771794 12775426 Vian7g00521 7 12771794 12775426 ECH
Vian7g00521 7 12771794 12775426 Vian4g02046 4 37286770 37288691 PCT