Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00519 ATGATCAAATGGGTGGCGCTGAATTTGACTTGTGTTTCGATTTCAACCTCTTGGGTTGATGAAATGATGCATCGGTTTTCATTGGTGATTCTTGTGCTGACAATATGTGGTGTGAGATGCAGAATGGCGAAAGCAGAAGAGAATGTGTACACGCTGGCTTCGGTGAGGGAGGATTTGATTAGGCAAGAGGATACCATCGTTTATGGTCTTATTGAGAGAGCCAAGTTTCCTTCCAATTCTCATACCTATGATGAGAAGTATGCTCAAATCCCTGGCTTTTATGGCTCATTGGTGGAGTTTGTTGTTAAAAATACTGAGGACGTTCAAGCTAAGGCTGGGAGATACACAAACCCTGAAGAAAACCCCTTCTTCCCTGAAAATTTACCACCATCAAGTGTGCCATCCTACCCCTTCTCACAGTTTTTGCATCCTGGAGCTGCTTCAATTAACATAAACAAGTCCGTCTGGAAAATGTATTTGCGAGATTTACTTCCATTGCTTGCTACTTCGGGTGATGATGGCAATTATGCGCAAACTGCTGCTGCTGATCTTTCATTACTGCAGGCTATCTCAAGAAGGATTCACTATGGAAAGTTTGTGGCTGAGGTGAAATTCCGGGATGCTCCTCAAGACTACGAGCCTTTAATTCGAGCAAAGGATAGAGAAGGTTTGATGAAATTGTTGACATTTACGAGCGTTGAAGAGACAGTGAGGAAGAGGGTTGAAAAGAAGGCCACAGTGTTTGGTCAGGAAGTAAGTCTTGACAGTGATAATGATGGCAATGGAAAAAGTAAGTTTGATCCAACAGTGGCTTCTCGTTTGTACAAAAATTGGGTGATACCTCTCACCAAAGAGGTTCAGGTTGAGTACCTCTTGCGCCGTGTAGACTGA 891 0.4321 MIKWVALNLTCVSISTSWVDEMMHRFSLVILVLTICGVRCRMAKAEENVYTLASVREDLIRQEDTIVYGLIERAKFPSNSHTYDEKYAQIPGFYGSLVEFVVKNTEDVQAKAGRYTNPEENPFFPENLPPSSVPSYPFSQFLHPGAASININKSVWKMYLRDLLPLLATSGDDGNYAQTAAADLSLLQAISRRIHYGKFVAEVKFRDAPQDYEPLIRAKDREGLMKLLTFTSVEETVRKRVEKKATVFGQEVSLDSDNDGNGKSKFDPTVASRLYKNWVIPLTKEVQVEYLLRRVD 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00519 296 NCBIfam chorismate mutase 51 296 IPR008238 GO:0004106|GO:0009073
Vian7g00519 296 PANTHER CHORISMATE MUTASE 43 296 IPR008238 GO:0004106|GO:0009073
Vian7g00519 296 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 44 296 IPR037039 GO:0004106|GO:0009073
Vian7g00519 296 PIRSF Chor_mut_AroQ_eu 39 296 IPR008238 GO:0004106|GO:0009073
Vian7g00519 296 FunFam Chorismate mutase 43 296 - -
Vian7g00519 296 ProSiteProfiles Chorismate mutase domain profile. 43 296 IPR008238 GO:0004106|GO:0009073
Vian7g00519 296 SUPERFAMILY Chorismate mutase II 46 296 IPR036263 GO:0046417
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00519 Vian-Chr7 12753486 12755893 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00519 K01850 - gmx:100791341 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00519 7 12753486 12755893 Vian7g00519 7 12753486 12755893 ECH
Vian7g00519 7 12753486 12755893 Vian4g02041 4 37211073 37212732 PCT