Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02041 ATGGATCCGTTAGAATTCCGTTGTAATGAGTGTCCCAGAAAGCCGAGAGGACGCTACACAGAAGAATCAGTAGTAGCGTTTTTGGCTAGACTAGAAGACACCATCATATTTGCTTTGTTTGAAAGAGTCAAGTTTCCTTTGAATCCCCCAACCTACGATCTGCTTGGCGGCCTCGTTCGTGAAACAGAGGCCCTTCAATTCAAGGCACATAGATACGATAATCCTGAAGAAAATCCGTTCTTCCCAGAAAGTTTACCACCCGTTGTTGCTGCACCAAAGTACCCATTTCCAGAATTTTTGCAAGGTGCAGGTGCTTCGATTAACATAAACAAGGAAATTTGGGAAATGTACTTTCATGAGCTGCTTCCAAAGTTTGTTAAATGCGGTGATGATGGCAACTATGCACAAACTGCTTTTGCCGATCTTACGTTGTTGCAGGCCATCTCAAAAAGGATTCATTATGGAAAATTTCTTGCTGAGGCCACTTTTAGATTTGCTGGTGGAGTCCTCGAGCCTTATATTCGTGCCAAGAACAAGGAAACATTGAAGGAATTGACAACACAGAGACTTGAAGATAAGGTGCTGAGGAGAGTTGAAAAGAAGGTCATGGTGTTTGGGCGGGAACTCAGCCAGGAACATGACTTCAAGGGAGAGGTTACTCTCTTATACGAGAAATGGTTAATTCCACTCACATCAAAGGTTGGACTCGAATACTTACTAAGACGCCTCGATTGA 735 0.4327 MDPLEFRCNECPRKPRGRYTEESVVAFLARLEDTIIFALFERVKFPLNPPTYDLLGGLVRETEALQFKAHRYDNPEENPFFPESLPPVVAAPKYPFPEFLQGAGASININKEIWEMYFHELLPKFVKCGDDGNYAQTAFADLTLLQAISKRIHYGKFLAEATFRFAGGVLEPYIRAKNKETLKELTTQRLEDKVLRRVEKKVMVFGRELSQEHDFKGEVTLLYEKWLIPLTSKVGLEYLLRRLD 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02041 244 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 16 244 IPR037039 GO:0004106|GO:0009073
Vian4g02041 244 NCBIfam chorismate mutase 26 244 IPR008238 GO:0004106|GO:0009073
Vian4g02041 244 ProSiteProfiles Chorismate mutase domain profile. 12 244 IPR008238 GO:0004106|GO:0009073
Vian4g02041 244 SUPERFAMILY Chorismate mutase II 24 244 IPR036263 GO:0046417
Vian4g02041 244 PANTHER CHORISMATE MUTASE 15 244 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02041 Vian-Chr4 37211073 37212732 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02041 K01850 - gmx:100791095 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02041 4 37211073 37212732 Vian4g02041 4 37211073 37212732 ECH
Vian7g00519 7 12753486 12755893 Vian4g02041 4 37211073 37212732 PCT