Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00466 ATGTTGTGTAAACTCGTTCCTGTGCCGCGCAAGAAAAAACCCGGTTCGAACCCGGTTTACCTTAACGTCTACGATCTCACACCGATTAACGGTTACGCTTATTGGCTTGGCCTCGGAGTTTACCATTCTGGCGTTCAAGTTCATGGGGTTGAATATGGATTTGGAGCTCATGAACGTGACACGACTGGGATTTTTGAAGTGGAGCCTAGACGCTGTCCTGGATTCACCTTCAGGAAATCGATTTTCATTGGATCGACGGATATGGGAGCGAGAGATGTTCGTGAGTTAATGGAGAGGATGGCTGAAGACTATTCTGGGAACACCTACCACCTTATCCAGAAAAATTGCAACCATTTCTGTGATGATGTTTGTGTCAAACTAACGGGGAAGTCCACCCCTCGCTGGGTGAATCGACTTGCTAGACTTGGTTTTTCTTCTGAATATGAAGGTTTTCTCTGCAACTGTGTTCTTCCACCCAGCCTAAATGAAACAAAGGTTCGCCAAGTTACATTAGACAGGGTTCAAGACGGAGAGAAGAAGAAAGTGAGAACACATTCCAGCAGTGTTGAGGTTGATACTGAGAGGTACTTGTCGACCACGCATGTGTTACTCATCGCATTTGCCGACAATCAAATCAAATAA 642 0.4548 MLCKLVPVPRKKKPGSNPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHERDTTGIFEVEPRRCPGFTFRKSIFIGSTDMGARDVRELMERMAEDYSGNTYHLIQKNCNHFCDDVCVKLTGKSTPRWVNRLARLGFSSEYEGFLCNCVLPPSLNETKVRQVTLDRVQDGEKKKVRTHSSSVEVDTERYLSTTHVLLIAFADNQIK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00466 213 ProSiteProfiles PPPDE domain profile. 17 161 IPR008580 GO:0008233
Vian7g00466 213 PANTHER DESUMOYLATING ISOPEPTIDASE 16 187 IPR008580 GO:0008233
Vian7g00466 213 Pfam PPPDE putative peptidase domain 18 146 IPR008580 GO:0008233
Vian7g00466 213 Gene3D PPPDE domains 12 181 IPR042266 -
Vian7g00466 213 SMART DUF862_2a 17 159 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00466 Vian-Chr7 11827662 11833942 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00466 K22763 - gmx:100786432 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00466 7 11827662 11833942 Vian4g02021 4 36866365 36867978 PCT