Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00451 ATGTTTGATATCAACAATAATGGGGAAATAAGTAAGGAAGAGTTCAAGAAAGTGATGGCATTGATGCGATCTCGTCATCGACAGGGTGTTCACCACAGGGATGGACTGCGAACTGGCCTAAAGGTGAACCATTCTGTTGAAGATGGAGGGCTGGTGGAATATTTTTTTGATAAAGATGGAAATGGATGCCTCCAGCATGATAAATTTGTTAAATTTTTAAGAGACTTGCATGATGAGATTCTGAGACTGGAGTTTGCTCATTATGACTACAAATCACAACAAACCATATCAGCCAAGGACTTTGCACTCTCCATGGTTGCTTCTGCAGACATGAGTCATCTAAGCAGGTTGCTTAAACGGGTTGATATGTTGAATGATGATCCATACCTCAAGGATGCACGTATCACATTCGAGGATTTCAAAAACTTTGCAGAGCTACGAAAAAAATTGTTGCCATTTTCATTGGCTGTTTTTAGTTTTGGAGAAGTAAACGGTCTGTTGACAAGAGACGATTTTCAGAGGGCAGCATCACAGGTATGCGGCATATCTCTCTCGGACAATGTGGTTGAAATTGTTTTCCATTTGTTTGACACAAATCGGGACGGAAATCTAAGTTTTGGTGAGTTTGTGAGGGTGCTACACAAGCGAGAATGGGACATTGCACAACCCGTGGAGAAAGGAAGCATGGGTTGGTTATCAGGCTTCTGGAATTCTAGTAATAACAGCTTCTCATCTTCTGGGTTGTTTTCCTGA 753 0.4143 MFDINNNGEISKEEFKKVMALMRSRHRQGVHHRDGLRTGLKVNHSVEDGGLVEYFFDKDGNGCLQHDKFVKFLRDLHDEILRLEFAHYDYKSQQTISAKDFALSMVASADMSHLSRLLKRVDMLNDDPYLKDARITFEDFKNFAELRKKLLPFSLAVFSFGEVNGLLTRDDFQRAASQVCGISLSDNVVEIVFHLFDTNRDGNLSFGEFVRVLHKREWDIAQPVEKGSMGWLSGFWNSSNNSFSSSGLFS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00451 250 SUPERFAMILY EF-hand 2 215 IPR011992 -
Vian7g00451 250 ProSiteProfiles EF-hand calcium-binding domain profile. 1 25 IPR002048 GO:0005509
Vian7g00451 250 Pfam EF hand 1 19 IPR002048 GO:0005509
Vian7g00451 250 Gene3D - 1 149 - -
Vian7g00451 250 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 1 236 IPR039800 GO:0005509|GO:0006851
Vian7g00451 250 Pfam EF-hand domain pair 165 214 IPR002048 GO:0005509
Vian7g00451 250 ProSiteProfiles EF-hand calcium-binding domain profile. 184 219 IPR002048 GO:0005509
Vian7g00451 250 ProSitePatterns EF-hand calcium-binding domain. 197 209 IPR018247 -
Vian7g00451 250 Gene3D - 162 227 - -
Vian7g00451 250 CDD EFh_MICU 1 216 - -
Vian7g00451 250 ProSitePatterns EF-hand calcium-binding domain. 3 15 IPR018247 -
Vian7g00451 250 SMART efh_1 188 216 IPR002048 GO:0005509
Vian7g00451 250 SMART efh_1 1 22 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00451 Vian-Chr7 11499782 11501893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00451 1 178 EF-hand Containing Proteins AT4G32060 69.663 3.75e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00451 K22827 - gmx:100806575 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00451 7 11499782 11501893 Vian4g01998 4 36624920 36629789 PCT