Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00436 ATGGCTTCCAACAAGCTTATTGCCACCATCTTGGTGCTTTCTCTCCTTGCCTACTCCACATCAACCTATGCATGTGGCACATGCCATCCCAAATCTCCTCCTCCTCCTCCTCCTCCTCCGTCCGGGAAGTGCCCTAAGGACACACTGAAGCTAGGGGCTTGTGCTGACATTCTAGGACTTGTTAATGTTGTTGTTGGCTCGCCTGTCTCTAGCAAGTGTTGTTCATTGCTTGAGGGTTTGGCTGATCTAGAGGCTGCACTTTGCCTCTGCACTGCCATCAAAGCCAATCTGCTTGGAATCAACTTGAATATCCCTATCACACTCAGTGTGCTCCTCAGTGCATGCCAGAAAAATGTTCCTTCTGGCTTCCAATGTCCATAG 381 0.4961 MASNKLIATILVLSLLAYSTSTYACGTCHPKSPPPPPPPPSGKCPKDTLKLGACADILGLVNVVVGSPVSSKCCSLLEGLADLEAALCLCTAIKANLLGINLNIPITLSVLLSACQKNVPSGFQCP 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00436 126 Pfam Hydrophobic seed protein 44 126 IPR027923 -
Vian7g00436 126 CDD HPS_like 47 125 IPR027923 -
Vian7g00436 126 PANTHER - 6 125 - -
Vian7g00436 126 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 47 126 IPR036312 -
Vian7g00436 126 SMART aai_6 44 125 IPR016140 -
Vian7g00436 126 Gene3D - 39 126 IPR036312 -
Vian7g00436 126 FunFam pEARLI1-like lipid transfer protein 1 42 126 - -
Vian7g00436 126 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00436 Vian-Chr7 11299681 11300061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00436 35 126 Acyl Lipid Metabolism Gene Families AT4G22490 36.957 5.91e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00436 - - gmx:100306307 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00436 7 11299681 11300061 Vian7g00436 7 11299681 11300061 ECH
Vian7g00436 7 11299681 11300061 Vian4g01985 4 36481461 36481985 PCT