Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00424 ATGGATCCAAGTAACCTTTTACCTGCTGATGGGGTTGAAGTGGTCCACCAAAATGGTGTCCATGATGAACCTTCAAATTCTGGGGAGGATGGTGGTGCTCCATATGATTTAGACCCCAGTGTCACTGAAACTGCAGAAACTGTTGCTTCAAATGGAAATTTTGATGATTTCCATCAGTCAGATAGTGCTGCAATTGATAACTCATTTGTGGCAGAAATCAAAGAATCAAATGACATTGTCGATGGCAATAACGTGATCATTACTAAGGAAGAGGATTCAAAAATATCAGACCAAACAAAACAATCAAGGGCAACAAAGGGTCTTGTCAAGAATAAGAATGCAAAGGCTCCAAGTTCCAGTGGAGTTCATGCAAGTTTGGTAAATAAGAGCAAAATTGGAAAAGATAAAGAAGCATCTTCATCTGTTTCAAATGGTACTTTAGCTTTAGACTCTCGCCCAAAACAGTCTATTAAAAGCAGCAAATTATTCAATGATCGGCAGACTCAATTGTCCAAGCCCAAGCACCCTTTGAAGTCTGATGAAGCATCTTCTGAAGTGTCAATGGAGAAGACAAAATCAAAATCATTGAGAAAAGGACCTGTTAAAGATCAAGGAGAAGAAGATTCTTCCCTAAGTACCAACAATGAAGATGCCAAACCTCATAGGGTGGGGACACTTCCAAATTATGGATTCAGTTTTAAGTGTGGCGAACGAGCTGAGAGAAGAAAAGAGTTCTATAATAAGCTTGAGGAAAGGATTCAGGCAAAGGAGGTGGAGAAGAGTAACTTGCAAGCAAAAACCAAGGAGACCCAAGATGCCGAGATTAAGAAGCTTAGGAAGAGTCTAAATTTTAAAGCAACTCCAATGCCAAGTTTTTATCAGGAGCCTGCTCCTCCTAAGGTTGAGCTAAAGAAGATACCAACTACAAGGCCAAAGTCTCCCAAGTTTGGTCGTAAGAAGACTTCTGCTAATTCAGAGTCAGATGGAAACACTAGCAGCAGTTCAAGATTAGCTCGCTTAAGTCTGGATGAGAAAGTGTCAGAGAGTAACCCCAGCAAGGGACCTAATCCTGTCCTTCAAAAGAAACCGCTTCGAAGATCTCTTCCTTCTCGTCTGACCTCTGAAAAGAACAATGTATCGAAATCAGCAACTGCACTTACATCATCCAAGGCCACCAAAGATGAAAAGTCTTCCTTATCTCGTGCTGCTAAAAAGAATATCAAAATATCCAATGCTACAGGAGAAGAGAAAACCGAGACGATTGCAGCGACCGAGGAGAAAAATATCTTGTCCAGTGAAACAGATGATGCTGTGCCTCTGAATGTGGTTCCTTCAGATAATAAGCCAAGTGAAGAAGACTCTCATGTGAATGTTGATATAGCAGTTGAAGAGAATCCTCTGCCCCCATTGGCACAAGAACCTGTTGCCACAGAGCAATGA 1440 0.4125 MDPSNLLPADGVEVVHQNGVHDEPSNSGEDGGAPYDLDPSVTETAETVASNGNFDDFHQSDSAAIDNSFVAEIKESNDIVDGNNVIITKEEDSKISDQTKQSRATKGLVKNKNAKAPSSSGVHASLVNKSKIGKDKEASSSVSNGTLALDSRPKQSIKSSKLFNDRQTQLSKPKHPLKSDEASSEVSMEKTKSKSLRKGPVKDQGEEDSSLSTNNEDAKPHRVGTLPNYGFSFKCGERAERRKEFYNKLEERIQAKEVEKSNLQAKTKETQDAEIKKLRKSLNFKATPMPSFYQEPAPPKVELKKIPTTRPKSPKFGRKKTSANSESDGNTSSSSRLARLSLDEKVSESNPSKGPNPVLQKKPLRRSLPSRLTSEKNNVSKSATALTSSKATKDEKSSLSRAAKKNIKISNATGEEKTETIAATEEKNILSSETDDAVPLNVVPSDNKPSEEDSHVNVDIAVEENPLPPLAQEPVATEQ 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00424 479 MobiDBLite consensus disorder prediction 318 356 - -
Vian7g00424 479 MobiDBLite consensus disorder prediction 15 40 - -
Vian7g00424 479 MobiDBLite consensus disorder prediction 137 170 - -
Vian7g00424 479 Pfam Targeting protein for Xklp2 (TPX2) domain 231 302 IPR027329 -
Vian7g00424 479 PANTHER PROTEIN WVD2-LIKE 4 97 435 IPR044833 GO:0008017
Vian7g00424 479 MobiDBLite consensus disorder prediction 403 428 - -
Vian7g00424 479 MobiDBLite consensus disorder prediction 171 205 - -
Vian7g00424 479 MobiDBLite consensus disorder prediction 370 393 - -
Vian7g00424 479 Coils Coil 246 273 - -
Vian7g00424 479 MobiDBLite consensus disorder prediction 100 126 - -
Vian7g00424 479 MobiDBLite consensus disorder prediction 88 231 - -
Vian7g00424 479 MobiDBLite consensus disorder prediction 286 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00424 Vian-Chr7 11068740 11072438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00424 - - gmx:100786958 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00424 7 11068740 11072438 Vian7g00424 7 11068740 11072438 ECH
Vian7g00424 7 11068740 11072438 Vian4g01972 4 36371373 36377554 PCT