Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01972 ATGATGGATCCAAGCAACCTTTTACCAGCCAATGGACTTGAAGAGGTCTACCAAAATGGTGTTAATGGCAAATTGTCTAACTCTGAAATGGATGGTATTACCTCAAATGTAGACCCTGCTGTCACTAAAATTGCACAAACTGAAGCTCCAAATGGAATTTCTGAAAATTTCATCCAGTATGATAGCACTGCAACTGATTACTCATCCAAGGCAGAAATCAAGGAAGGATCAGATGACTACTTATGTGTGAACAATGTCACCATTTCTAAGGAAGAGAAAGCAGAAATCATAGACCAGACAGAGCAATCAAAAGCAGGAAAAGGTTCTCTCAAGAGTAAGAATGCAAAGTCACCAAGCCCCAGAGGTGTTCATGCAAGTTCAATTAAAAAGAACAAAGATGGAAAAGGTGAAGAGGTAGTATCTACTGTTTCCAATGGTACTTTTACTTCAGACTCCATCCCAAGAGAGCATATTAAAAATAGATCATTGACGGACAAGCAGGCTCGACTGTCGAAGCATGCTGGGAAGTCTAGCGTGGCACCTTCGGAAGCATCAATGGAGAAGAACAGACCACGATTATCAAAGAAAGGGCCCTCTGATAATCTTAATCTTCAAGAAGAAGCAGAATCTTCTTCTCCTACTGCAGAAGATGCAAAACCTCGCAGGGTAGGGATGCTCCCAAATTATGGATTCAGTTTCAAGTGTGATGAGCGAGCTGAGAGAAGAAGAGAGTTCTACACTAAACTTGAGGAAAAGATTCACGCAAAGGAAGTGGAGGAGAGTAACCTGCAAGCGAAAACCAAGGAGACCCAGGAAGCCGAGATTAAGATGCTTAGAAAAAGTCTAGGATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAGCCTCCTCCTCCTAGAGTAGAATTTAAAAAGATGCCCACTACAAGAGCTAAATCTCCCAAACTTGGTCGTAAGAAGAGTTCACTGGTTTCGGAGTCAGAAGGAAACACTAGCAATAGTGTTCGACAAGGTCGATTAAGTCTGGATGAGAAAGTGTCTCAGACTAACCTCACTAAAGGAGTTACTCTTGTTCATCAAAAGAGGACACAACGAAAGTCTCTTCCTCCTCGACTGACTTCTGAAAAGACCAGTTCATCCAATCCGGCATCTATTCGGACCCCATCTAAGGCAGTGAATGATGACAAAACCTCATTATCAGGTGTAACAACTGAAGTTACCACCTTATCCATTTCAACTGGGGAAGAGAAAGTTGAAGCAGTCGCAGCCACTGAAGAGAGCAATGTCTTATTGGATGAGACAAGTAAAACTCTGCCTCTGATTGTAGAGCCAAGTGAAGCCAAGTCACCTGCTGTGAATGGGGATTTAGCCATTGAAGAGAAACCGCAACAACTCACCTTGTCACAAGAACCTATAGTGGCAGAGCTCTGA 1431 0.4277 MMDPSNLLPANGLEEVYQNGVNGKLSNSEMDGITSNVDPAVTKIAQTEAPNGISENFIQYDSTATDYSSKAEIKEGSDDYLCVNNVTISKEEKAEIIDQTEQSKAGKGSLKSKNAKSPSPRGVHASSIKKNKDGKGEEVVSTVSNGTFTSDSIPREHIKNRSLTDKQARLSKHAGKSSVAPSEASMEKNRPRLSKKGPSDNLNLQEEAESSSPTAEDAKPRRVGMLPNYGFSFKCDERAERRREFYTKLEEKIHAKEVEESNLQAKTKETQEAEIKMLRKSLGFKATPMPSFYQEPPPPRVEFKKMPTTRAKSPKLGRKKSSLVSESEGNTSNSVRQGRLSLDEKVSQTNLTKGVTLVHQKRTQRKSLPPRLTSEKTSSSNPASIRTPSKAVNDDKTSLSGVTTEVTTLSISTGEEKVEAVAATEESNVLLDETSKTLPLIVEPSEAKSPAVNGDLAIEEKPQQLTLSQEPIVAEL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01972 476 MobiDBLite consensus disorder prediction 370 398 - -
Vian4g01972 476 Coils Coil 246 276 - -
Vian4g01972 476 MobiDBLite consensus disorder prediction 97 229 - -
Vian4g01972 476 MobiDBLite consensus disorder prediction 138 153 - -
Vian4g01972 476 Pfam Targeting protein for Xklp2 (TPX2) domain 231 302 IPR027329 -
Vian4g01972 476 MobiDBLite consensus disorder prediction 196 211 - -
Vian4g01972 476 PANTHER PROTEIN WVD2-LIKE 4 94 426 IPR044833 GO:0008017
Vian4g01972 476 MobiDBLite consensus disorder prediction 287 398 - -
Vian4g01972 476 MobiDBLite consensus disorder prediction 154 172 - -
Vian4g01972 476 MobiDBLite consensus disorder prediction 323 363 - -
Vian4g01972 476 MobiDBLite consensus disorder prediction 102 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01972 Vian-Chr4 36371373 36377554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01972 - - gsj:114408962 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01972 4 36371373 36377554 Vian4g01972 4 36371373 36377554 ECH
Vian7g00424 7 11068740 11072438 Vian4g01972 4 36371373 36377554 PCT