Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00422 ATGGATGAAGCTTCTAAAGGACTAAGAGGTCAAGAACAACCAGTGACTAGAATGGAAGGATCAGATGGCTTCTGGAGCAGCAGCACTTTTGAATTAGACCCCAGTGAAGCTCACTCGCAGAGAAGCATGTCATCAATCGGAATATCAAATAATCCTTCTGATCCTCAAAGTATTGGAGGCAGTCAAAGTGGTCCTCCTGAATTTGTCAACCATGGCAAGTTTGCTATTATATATGTTCATCATCTGTTGGTTCTCTGCTATGGAAACAGGCTTCTTCTCTGGAACCAGATAAGGCAACAATGGGTAGGAAAGAAAGGGTCTGAGAGTATCACAGAAATTCAAGAACCAAGAATAAGTTCCAATGCAACCTATGACACCTTACTTGGGAGCAACAAGCCCTTTCCCCAACGCATTCCTTTGAGAGAAATGGTTGACTTTCTTGTTGATGTTTGGGATCAAGAGGGTTTGTATGACTGA 477 0.4256 MDEASKGLRGQEQPVTRMEGSDGFWSSSTFELDPSEAHSQRSMSSIGISNNPSDPQSIGGSQSGPPEFVNHGKFAIIYVHHLLVLCYGNRLLLWNQIRQQWVGKKGSESITEIQEPRISSNATYDTLLGSNKPFPQRIPLREMVDFLVDVWDQEGLYD 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00422 158 MobiDBLite consensus disorder prediction 20 64 - -
Vian7g00422 158 PANTHER OS07G0479600 PROTEIN 4 158 - -
Vian7g00422 158 Pfam Protein of unknown function (DUF4050) 118 158 IPR025124 -
Vian7g00422 158 MobiDBLite consensus disorder prediction 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00422 Vian-Chr7 11028718 11030156 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00422 - - pvu:PHAVU_001G051400g 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00422 7 11028718 11030156 Vian7g00422 7 11028718 11030156 ECH
Vian1g00983 1 10359586 10362565 Vian7g00422 7 11028718 11030156 ECH