Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00983 ATGGTGATGATTACTGCTTGGATCGCTGACCTCTTCGCTTGTATGGGTGGTTGCTTTGGATGTTGTATGAAACCAACACCAATAATTGCTGTGGATGAGCCGGCAAAGGGACTAAGAATTCAGGGGCAGACAGTGAGAAAACCACATATATCAGATGGTTTCTGGAGTTCAAGCACTTGTGATCTGGATAATGGCAACATTCAATCTCAGAGAAGTATCTCGTCTGTCAGTACATTAAATCAAATTCTCTATCATAGTGGTGGAACTTCTACTACAGGCACCAACTCTGAATTTGTAAACCCAGGTCTTCTTCTCTGGAACGAAAGTAGGCTTCAGTGGATTGGAAGTGAAAAATCTAGCAAGCCTAGCCAACAAAAACGTGAACCCAGACTGAATTGGAATGCAACTTACGAAAGTTTGCTTGGGACTAGACAACCTTTCCCCAAGTCCATACCTTTATCTGAAATGGTCGAATTCCTGGTGGATGTTTGGGAACGTGAAGGGATGTATGGTTGA 516 0.4302 MVMITAWIADLFACMGGCFGCCMKPTPIIAVDEPAKGLRIQGQTVRKPHISDGFWSSSTCDLDNGNIQSQRSISSVSTLNQILYHSGGTSTTGTNSEFVNPGLLLWNESRLQWIGSEKSSKPSQQKREPRLNWNATYESLLGTRQPFPKSIPLSEMVEFLVDVWEREGMYG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00983 171 PANTHER OS07G0479600 PROTEIN 4 170 - -
Vian1g00983 171 Pfam Protein of unknown function (DUF4050) 131 170 IPR025124 -
Vian1g00983 171 Pfam Protein of unknown function (DUF4050) 58 129 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00983 Vian-Chr1 10359586 10362565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00983 - - gmx:100813288 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00983 1 10359586 10362565 Vian9g00100 9 789214 791430 ECH
Vian1g00983 1 10359586 10362565 Vian7g00422 7 11028718 11030156 ECH
Vian1g00983 1 10359586 10362565 Vian1g00983 1 10359586 10362565 ECH