Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00390 ATGGCCTCTACTCTCTCTGAAGCCTACAGAGACTACCCTCTCCACCTCCATCATATTATCCCCTTAGACTTTTCTTCACTTAGGACCTTGCCTGAAACCCATGCATGGCCTCAATCTGAAGATGGTCATCATCACGATGATGATGATGATGGGGGTGGATCATGCATACCCATCATTGACCTCATGGATCCTAATGCCATGGAACTCATAGGCCTTGCTTGTGAGAAGTGGGGTGCCTTCCAATTGAAGAACCATGGCATACCCTTAAGTGTTGTTGAAGAGGTTGAAGAAGAAGCTAAGAGGCTCTTTGCCCTCCCCGCCGACAGGAAATTGAAGGCCCTACGATCCGCCGCCGGGGCCACCGGCTACGGCCGGGCACGGATATCATCATTCTTCCCCAAGCACATGTGGCATGAAGGATTCACCATCATGGGGTCTCCATGCGATGATGCCAAAAAGATTTGGCCTAATGACCATACACGGTTTTGCAACATAATGGAGAATTACCAGAAGCAAATGAAGCTGCTAGCAGAGAAGCTAACCCAGATGATATTGACATTGTTGAAGATTTCTGAAGATGGAAAGGGGTGGATTGGTTCAAGTGACCTGTGTGAAGCTGTTCAGCTGAACTTCTACCCTTGTTGCCCTGAGCCAAACCGAGCCATGGGTCTAGCCCCTCACACGGACACTTCGCTCTTCACAATCCTCCACCAGAGCCAAACGAATGGCCTGCAAATCTTCAAGGAGGGTGCAGGGTGGGTCTCCGTGCACCCTCACCCCGACACCCTTGTTGTTCACACCGGTGACATTCTTCACATCTTGTCCAACTCAAGGTTCCGTTGTGCATTGCATCGTGTCATGGTCAACAGTGCAAGACAAAGATACTCTGTGGCCTATTTCTATGGCCCCCCTTTGGATTATGTACTCTCTCCATTGCTTCTTCTCACTCCTTTCCCTCGTTTTCGTTCTTTGTCTATCAAGGAGTACATTGGCATCAAGGCCAAGAACCTTGGTGAAGCATTGTCTTTGATTAGTACCATTCAAAACTAA 1050 0.4886 MASTLSEAYRDYPLHLHHIIPLDFSSLRTLPETHAWPQSEDGHHHDDDDDGGGSCIPIIDLMDPNAMELIGLACEKWGAFQLKNHGIPLSVVEEVEEEAKRLFALPADRKLKALRSAAGATGYGRARISSFFPKHMWHEGFTIMGSPCDDAKKIWPNDHTRFCNIMENYQKQMKLLAEKLTQMILTLLKISEDGKGWIGSSDLCEAVQLNFYPCCPEPNRAMGLAPHTDTSLFTILHQSQTNGLQIFKEGAGWVSVHPHPDTLVVHTGDILHILSNSRFRCALHRVMVNSARQRYSVAYFYGPPLDYVLSPLLLLTPFPRFRSLSIKEYIGIKAKNLGEALSLISTIQN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00390 349 Gene3D - 17 337 IPR027443 -
Vian7g00390 349 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 56 329 - -
Vian7g00390 349 SUPERFAMILY Clavaminate synthase-like 17 336 - -
Vian7g00390 349 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 156 IPR026992 -
Vian7g00390 349 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 203 303 IPR005123 -
Vian7g00390 349 Coils Coil 166 186 - -
Vian7g00390 349 FunFam Gibberellin 3-beta-dioxygenase 1 18 332 - -
Vian7g00390 349 Pfam 2OG-Fe(II) oxygenase superfamily 206 303 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00390 Vian-Chr7 10471869 10473650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00390 56 329 Glycosyltransferase AT5G59530 29.054 6.36e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00390 K04124 - gmx:100780857 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01932 4 35886805 35887937 Vian7g00390 7 10471869 10473650 PCT