Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01932 ATGAAAATGAGTACTCTGAATGAAGCATACCAAGAACACCCTCTTACCCTTGGTGATATCATCCCCATAGACTTTTCTTCTTCCTTTAGTTTACCCGATTCCCACACATGGTCTCAACCCATTGATGATGATGATGGTTTCTCATTGAAAGATGCTGGATCATCACCCATGCCCACCATAGACCTCATGGATCCCAATGCCAAGAAACTCATAACCCTTGCATGTGAGAAATGGGGTGGCTTCCATTTGAAGAATCACGGAATACCCTTTGCTGTCATTCAAGGTGCTGAAGATGAACTCCAACGCCTCTTCTCTCTCCCACCTCCACAAAAAATGAAGGCTCTCAGATCCCCCGGTGGTGCCACTGGATATGGCATCCCAAGGATTTCACCTTTCTTCTCCAAGTTCATGTGGCACGAAGGATTCACCATCATCGGTTCTCCCTCTCACGATGTAAAAAAGTTATGGCCCAATGATTATCAACAATTTTGTGACAAAATGGAGAACTATCAGAAGGAAATGAATACTTTAGCGGAGAGTCTGACAGAAATGGTGTTCGACGTGTTGGAGATTTCTGAGGAAAAAAGGAAGTGGATGGGTGCAAGCGACCTGCGCATGGCTCTGCAGTTGAATTTCTACCCAAGCTGTCCCGAACCGAGCCGAGCCATGGGTTTGGCTCCTCACACTGACACTTCTATCTTCACAATTGTTCATGTTAAAGAAAGTGGTCTTCAACTCATGAAGGAAGGAAAGTGGATCAATGTGCAGCCTCCGCCCGACACTCTCCTTGTTCACGCCGGCGATTTTCTGCACATGATGTCCAATGGACGCTTCTGCAGCCCACTTCATCGCGTTGTGCCGACTGTGAGCAAGAAACGTTGCTCCATTGCTTATTTCTACTCTCCACCCACAGATTATGTGGTGTCTCCATCGGTGACCGGAGATCTTGATGCTGCTCGTTTTCGTGATGTGACTGTGATGGAGTATATTGGGATCAAGGCTGAGAAATTTGGAGAGTCTCTCTCTGTCATTAGCATTTGA 1041 0.4649 MKMSTLNEAYQEHPLTLGDIIPIDFSSSFSLPDSHTWSQPIDDDDGFSLKDAGSSPMPTIDLMDPNAKKLITLACEKWGGFHLKNHGIPFAVIQGAEDELQRLFSLPPPQKMKALRSPGGATGYGIPRISPFFSKFMWHEGFTIIGSPSHDVKKLWPNDYQQFCDKMENYQKEMNTLAESLTEMVFDVLEISEEKRKWMGASDLRMALQLNFYPSCPEPSRAMGLAPHTDTSIFTIVHVKESGLQLMKEGKWINVQPPPDTLLVHAGDFLHMMSNGRFCSPLHRVVPTVSKKRCSIAYFYSPPTDYVVSPSVTGDLDAARFRDVTVMEYIGIKAEKFGESLSVISI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01932 346 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 57 329 - -
Vian4g01932 346 Coils Coil 160 180 - -
Vian4g01932 346 Gene3D - 27 337 IPR027443 -
Vian4g01932 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 203 302 IPR005123 -
Vian4g01932 346 Pfam 2OG-Fe(II) oxygenase superfamily 208 302 IPR044861 -
Vian4g01932 346 SUPERFAMILY Clavaminate synthase-like 25 337 - -
Vian4g01932 346 Pfam non-haem dioxygenase in morphine synthesis N-terminal 58 157 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01932 Vian-Chr4 35886805 35887937 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01932 57 329 Glycosyltransferase AT5G59530 27.027 1.17e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01932 K04124 - gmx:100818754 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01932 4 35886805 35887937 Vian7g00390 7 10471869 10473650 PCT