Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00056 ATGTTAGAAAAAGAAGAGAAAAGAAAGCAGAAAAAAAGAAGCATGAAGAGAGTGCTCCTACTACTAAACTCGGTTCTTCTAGCTCTAGGCACTTCCGGTGGCCCCCTCGTAATGCGTCTCTACTTCATCCACGGCGGCAACCGAATCTGGCTCTCCAGTTTCCTCGAAACCGCCGCTTTCCCTCTCATTTTCATTCCCTTAACAATCTCTCACTTTCATCCCACTTCTCATCATTCACCCAAACCTAACCTCGTCTCCATCAAACTGCCTCTCTTTCTCGCCTCCGCCGTTATCGGAATCCTCACCGGCCTCGACGACTACCTCTACGCCTGCGGCATAGCGCGCCTTCCCGTCTCCACTTCCTCCCTTATCCAAGCCTCGCACCTCGCCTTCACCGCCATCTTCGCCTTCCTCCTCGTTAGGCACAGGTTCACGGTGTACTCAGTCAACGCCGTCGTGCTTCTCACCGTCGCGGCGGTGGTTCTGGCGCTGCGTTCCGGTGGAGACCGTCCGCCAGGCGAGTCCACGCGGCAGTACGTGATCGGTTTCGTTATGATTCTGGCGGCTGCAGCGCTGTACGGATTGGTCCTGCCGTTGATGGAGTTGGTGTACAAACGGAGCAAGCAGCGCGTTACGTACTCTCTGGTGATGGAGATTCAGCTTGTGATGTGCTTCTTTGCTACCTTGTTCTGCACCCTTGGCATGCTCATCAATAATGACTTCAAGGTGATTTCGCGAGAAGCAAAAGACTATGAACTTGGGGAAAGCAAGTACTATGTTGTGCTGGTGGGGAGTGCAATAATGTGGCAGTTCTTCTTCTTGGGAGCAATAGGGGTTATCTTTTGCTCCTCGTCTTTGTTTTCAGGAATTATAATTGCTGCTTTTCTTCCAGTGACCGAAGTTTTGGGTGTTATTGTATACAAAGAAAATTTTGAGGCAGAGAAAGGGGTTGCTTTGGTGCTGTCTCTTTGGGGGTTTGTGTCATATTTCTATGGTGAAATTAAACAAGACAGGGAAAACAACAAGAATGGTTGCCCAGAAACAGAGCTACCTCAAAGTCTTTCTCCCAATGCATGA 1077 0.4995 MLEKEEKRKQKKRSMKRVLLLLNSVLLALGTSGGPLVMRLYFIHGGNRIWLSSFLETAAFPLIFIPLTISHFHPTSHHSPKPNLVSIKLPLFLASAVIGILTGLDDYLYACGIARLPVSTSSLIQASHLAFTAIFAFLLVRHRFTVYSVNAVVLLTVAAVVLALRSGGDRPPGESTRQYVIGFVMILAAAALYGLVLPLMELVYKRSKQRVTYSLVMEIQLVMCFFATLFCTLGMLINNDFKVISREAKDYELGESKYYVVLVGSAIMWQFFFLGAIGVIFCSSSLFSGIIIAAFLPVTEVLGVIVYKENFEAEKGVALVLSLWGFVSYFYGEIKQDRENNKNGCPETELPQSLSPNA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00056 358 PANTHER OS09G0467300 PROTEIN-RELATED 5 342 IPR030182 GO:0015211|GO:0016020
Vian7g00056 358 Pfam Purine nucleobase transmembrane transport 19 338 - -
Vian7g00056 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 88 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00056 Vian-Chr7 2376803 2378407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00056 15 351 Organic Solute Cotransporters AT1G28230 55.043 9.00e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00056 - - vra:106764151 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00056 7 2376803 2378407 Vian7g00056 7 2376803 2378407 ECH
Vian7g00056 7 2376803 2378407 Vian4g01686 4 32867214 32868373 PCT