Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01686 ATGGCCCAAGGAAGCGAAGGAGAGAAAAACAGAACCATGAAACGGATTCTTCTCATAATAAACTGTCTCTTACTCGCCGTCGGAACCGCCGGCGGCCCCCTCGTTATGCGTCTCTACTTCCTCCGTGGCGGCAACCGTGTCTGGCTTTCCAGCTTCCTCGAAACAGCCGGCTTCCCCTTCATGCTACTCCCCCTCGCCGTCTCTTACTTCCGCCGCCGCGCAGCGGCGGTAGCGGCGGGGACCGCTAAACCCAGTCCGGTCTCGATGAAACCCCCTCTCCTCGCGGCCTCCGTCTTCATCGGAGTCCTCACCGGCCTCGACGACTATCTCTACGCCTACGGCGTGGCGCGCCTCCCCGTGTCCACGTCATCACTCATCATCGCCACACAACTCGGCTTCACCGCCCTGTTCGCGTTCCTGCTGGTGCGCCAGAAGTTCACCTCGTACTCCGTGAACGCAGTAGTTTTGCTTACCGTCGGCGCCGGCGTTCTGGCGCTCCACAGCAGCGGAGACCGCCCCCCCGGCGAGTCTGTGAAGGCCTACGTGATGGGGTTCGTGATGACAGTAATCGCTGCAGCATTGTACGGCTTCGTGTTACCCATGGTGGAGTTGGTGTACAAAAAAACCAAACAACCCATTACCTATTCCCTTGTCATGGAGATTCAGTTCGTGATGTGCTTCTCCGCCACTCTCTTTTGCCTCATCGGCATGATCATTAACAACGACTTTAAGGTGATTCCGAGAGAAGCTAAAACATTCAAGCACGGGGAAGTTAATTATTACGTTGTGTTGGTGGGGAGTGCAATAATATGGCAAGCTTTTTTCTTGGGAGCTATTGGGGTTATTTTCTGTGCGTCGTCTTTGTTTTCTGGTATTTTGATTGCGGTGCTGCTACCCGTAACGGAAGTGTTGGCGGTTATTTTCTACAAAGAGAAGTTTCAAGCTGAGAAGGGTGTTTCTCTGTTTCTGTCGCTCTGGGGCATGGTGTCTTACTTCTATGGGGAGATTAAACATGAGAAGAAGATGAAGAAAAAGAAGAGCAGCGACATGGAAGCAACAGAGATGCCTGAAATGGGAGTGATTGAAAAATGA 1092 0.5302 MAQGSEGEKNRTMKRILLIINCLLLAVGTAGGPLVMRLYFLRGGNRVWLSSFLETAGFPFMLLPLAVSYFRRRAAAVAAGTAKPSPVSMKPPLLAASVFIGVLTGLDDYLYAYGVARLPVSTSSLIIATQLGFTALFAFLLVRQKFTSYSVNAVVLLTVGAGVLALHSSGDRPPGESVKAYVMGFVMTVIAAALYGFVLPMVELVYKKTKQPITYSLVMEIQFVMCFSATLFCLIGMIINNDFKVIPREAKTFKHGEVNYYVVLVGSAIIWQAFFLGAIGVIFCASSLFSGILIAVLLPVTEVLAVIFYKEKFQAEKGVSLFLSLWGMVSYFYGEIKHEKKMKKKKSSDMEATEMPEMGVIEK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01686 363 Pfam Purine nucleobase transmembrane transport 16 341 - -
Vian4g01686 363 PANTHER OS09G0467300 PROTEIN-RELATED 8 348 IPR030182 GO:0015211|GO:0016020
Vian4g01686 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 79 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01686 Vian-Chr4 32867214 32868373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01686 28 356 Organic Solute Cotransporters AT1G28230 63.473 2.07e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01686 - - gmx:100803818 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01686 4 32867214 32868373 Vian4g01686 4 32867214 32868373 ECH
Vian7g00056 7 2376803 2378407 Vian4g01686 4 32867214 32868373 PCT
Vian4g01686 4 32867214 32868373 Vian7g01240 7 20592504 20596236 PCT