Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00036 ATGCAGAGGCGCAAGTGGATTCCGTTGGCGCTGCTGAGAAAGTTGCTCATTTCAGCCATAGCCTGCATAGCGTTTGTGGCTCTCTTCTCTGTGCGCATACACATTGTCCCTTCCTCTAAGGATCAAAGGTTCAACGACAAGATCTCCACGGCTCAGGATCTGCACAGCTGGACGCGGGAGCTCGCACCGCCACATTTGTCCAAAGCTCCACTTTCTACTCCCAAGTTGAGTGGTACAAGAGGGTACTTAGATTATCAGAAGTTGTGGAAGCCTCCATCAAATCGTGGGTTTTTTCCGTGCACAAATCCCACACCTAAATACACTACTCCCACAGAGTCGCGAGGATATCTTTTAGTACACACAAATGGTGGGCTCAACCAAATGCGTTCTGGGATATGTGATATGGTAGCAGTGGCTCGTATAATAAATGCCACTCTTGTAATTCCAGAACTTGATAAAAGATCATTTTGGCAAGATACTAGCAATTTCTCTGATGTTTTTGATGAAGAGCATTTTATGAATTCTCTAGCCAATGATGTAAAAATCATTAAAAAATTCCCTAACGATCTGGTTAATGAAACCAAAGTGGTCAAACAATTCATAAGCTGGTCTGGCATGGATTACTACGAGAATGAGATTGCTAGCTTGTGGGAAGAATACCAAGTTATTCGAGCTTCCAAATCTGATTCACGATTAGCAAACAACAATCTACCTCCAGACATTCAGAAGCTTCGATGCCGGGCTTGTTATGAAGCACTTCGCTTCTCTCCTCACATTGAACAACTGGGAAAATTGTTGGTGGAGAGGATGAGGTCATTTGGTCCTTACATTGCGCTGCACTTGCGTTACGAGAAGGATATGCTTGCATTTAGTGGCTGCACCCATGATTTATCTCTTGTTGAAGCTGAAGAGCTACGGATGATCAGGGAGAACATTTCCTATTGGAAAATAAAGGAGATTGATCCAATAGAACAGAGGTCCAAAGGGCTTTGCCCCTTAACTCCAAAGGAAGTTGGGATTTTTCTTACTGCTCTTGGATACCCATCAACAACTCCGATATATATTGCTGCTGGAGAGATATATGGGGGCGAGTCCCACATGGCTGAATTGCGTTCCCGGTATCCATTGTTGATGAGCAAGGAAAAGTTAGCATCTATAGAAGAGCTTGAACCTTTTTCCAATCATGCATCCCAAATGGCCGCTCTTGACTATATTGTATCTATTGAAAGTGATGTATTCATAGCTTCTTATTCTGGAAACATGGCAAAAGCTGTTGAGGGTCATCGTCGTTTTCTTGGACGTGGAAGAACAATATCTCCAGACAAGAAAGCCCTCGTTCGCCTGTTTGATAAACTGGATCAGGGACTAATGGCGGAGGGGAAGAAACTATCAAATAGGATTATTGATCTCCACAGAAGACGACTTGGTTCTCCCAGAAAGAGAAAAGGGCCAATTTCTGGGACAAAGGGCATGGAAAGGTTCCGGTCAGAAGAAACCTTTTATGCAAATCCCTTACCTGATTGTTTATGCCGGACAGAACCACCACCACCACCACTAAACACCTCTCACATTGTTTGA 1578 0.4379 MQRRKWIPLALLRKLLISAIACIAFVALFSVRIHIVPSSKDQRFNDKISTAQDLHSWTRELAPPHLSKAPLSTPKLSGTRGYLDYQKLWKPPSNRGFFPCTNPTPKYTTPTESRGYLLVHTNGGLNQMRSGICDMVAVARIINATLVIPELDKRSFWQDTSNFSDVFDEEHFMNSLANDVKIIKKFPNDLVNETKVVKQFISWSGMDYYENEIASLWEEYQVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPHIEQLGKLLVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSLVEAEELRMIRENISYWKIKEIDPIEQRSKGLCPLTPKEVGIFLTALGYPSTTPIYIAAGEIYGGESHMAELRSRYPLLMSKEKLASIEELEPFSNHASQMAALDYIVSIESDVFIASYSGNMAKAVEGHRRFLGRGRTISPDKKALVRLFDKLDQGLMAEGKKLSNRIIDLHRRRLGSPRKRKGPISGTKGMERFRSEETFYANPLPDCLCRTEPPPPPLNTSHIV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00036 525 FunFam O-fucosyltransferase 28 247 441 - -
Vian7g00036 525 Pfam GDP-fucose protein O-fucosyltransferase 116 431 IPR019378 -
Vian7g00036 525 PIRSF UCP009360 2 514 IPR024709 -
Vian7g00036 525 CDD O-FucT_plant 116 437 IPR024709 -
Vian7g00036 525 PANTHER OS02G0726500 PROTEIN-RELATED 15 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00036 Vian-Chr7 1715526 1736040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00036 37 514 Miscellaneous Gene Families AT1G22460 68.201 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00036 - - gmx:100795727 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00036 7 1715526 1736040 Vian7g00036 7 1715526 1736040 ECH
Vian7g00036 7 1715526 1736040 Vian4g01669 4 32661771 32665349 PCT