Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00029 ATGGCAATCTCCTCAACTTCTAACTCTCTCATTCCCACCAAATCTCTCATCCCCCAATCCAACCCTCTCCTTCCATCCACAAACATCAGGCCTGCCCTCAAGCCCAGGCCCGGCCCATCTCCTTCCATCTTTGCAGTCCACGCGGCCGAGCCCGCCAAAAACCCCGTCGTCTCCGACAAGCCCAAGCCCCAGTCCCCGCCTTCCCCGGCCCCGGCCCGGGCCGGAAAATGGGCCGTGGACAGCTGGACAGCGAAGAAGGCCCTGCAGCTGCCCGAGTACCCGAGTAAGGAGGATCTGGAGTCCGTTCTCCACACGCTCGAGGCGTTTCCCCCTATCGTCTTCGCCGGCGAGGCACGGACGCTGGAGGAACGCCTGGGCGAAGCTGCTCTCGGAAATGCCTTCCTACTCCAAGGCGGTGACTGCGCCGAAAGCTTCAAGGAGTTCAATGCCAACAACATCCGTGACACCTTCCGAATCCTCCTCCAGATGAGCGTCGTCATGATGTTCGGCGGCCAAATGCCTGTCATCAAGGTGGGGAGAATGGCTGGGCAGTTTGCGAAGCCGAGATCGGATTCGTTTGAGGAGAAAAACGGCGTGAAGCTTCCGAGTTACAGAGGGGATAATATTAACGGAGATGCGTTTGAGGAGAAGTCAAGGATTCCGGATCCGCAGAGGATGATCAGGGCTTATTGTCAAGCTGCAGCTACGCTTAATCTTCTCAGAGCTTTCGCCACTGGAGGTTATGCCGCTATGCAGAGGGTTACTCAATGGAATTTGGACTTCACCGAGCACAGTGAACAGGGAGATAGGTTGGATTCAACTTCTGGTCTCTACTATGATTGCTCAGCCCATATGCTTTGGGTTGGAGAACGAACCAGACAGCTCGATGGTGCGCATGTTGAGTTTCTAAGAGGAGTTGCTAATCCCTTGGGAATTAAGGTGAGTGATAAGATGGATCCAAATGAGCTTGTTAAACTCATTGAGATCTTGAATCCCCAAAACAAACCAGGGAGAATAACTGTGATCACAAGGATGGGAGCTGAAAATATGAGGGTGAAGCTTCCACATCTCATCAGGGCAGTGCGCAGGGCAGGACAAATTGTCACTTGGGTCAGTGATCCTATGCACGGAAACACCATTAAGGCTCCCTGTGGTCTTAAAACTCGCCCCTTCGATTCCATCAGGGCTGAGGTGAGAGCATTCTTCGATGTGCACGAGCAAGAAGGAAGCCACCCAGGAGGGGTTCATCTAGAGATGACGGGTCAAAATGTGACAGAGTGCATTGGTGGATCAAGAACAGTGACATTTGATGACTTGAGCTCACGTTACCACACACACTGTGACCCAAGGCTCAATGCTTCACAATCTCTTGAGCTTGCTTTCATCATCGCTGAGCGTTTGAGAAAGAGCAGGATGAGATCGCAGGAAGCAAGTGCCCCTTTAGGACTGTAA 1452 0.5296 MAISSTSNSLIPTKSLIPQSNPLLPSTNIRPALKPRPGPSPSIFAVHAAEPAKNPVVSDKPKPQSPPSPAPARAGKWAVDSWTAKKALQLPEYPSKEDLESVLHTLEAFPPIVFAGEARTLEERLGEAALGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVMMFGGQMPVIKVGRMAGQFAKPRSDSFEEKNGVKLPSYRGDNINGDAFEEKSRIPDPQRMIRAYCQAAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITVITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKSRMRSQEASAPLGL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00029 483 Gene3D Aldolase class I 110 469 IPR013785 -
Vian7g00029 483 SUPERFAMILY Aldolase 71 468 - -
Vian7g00029 483 MobiDBLite consensus disorder prediction 1 76 - -
Vian7g00029 483 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 270 477 IPR002480 GO:0003849|GO:0009073
Vian7g00029 483 Pfam Class-II DAHP synthetase family 271 464 IPR002480 GO:0003849|GO:0009073
Vian7g00029 483 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00029 Vian-Chr7 1445019 1449126 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00029 K01626 - gmx:100797019 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00029 7 1445019 1449126 Vian7g00029 7 1445019 1449126 ECH
Vian7g00029 7 1445019 1449126 Vian4g01663 4 32597067 32600687 PCT