Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01663 ATGGCTACCGCCGCTTCCAACTCTCTCTTTCAAACCAAATCCATTCTTCCAACCCACCCTATCTTGCCTTCATCCACCACCCAATGCTACTCCGTTCGAGGGTCCAGGCCCAAACCTAGGCCCATCCAATCCGTTCAAGCAGCCGACAACTCCGTCAATGTAGTAACCGACGGCAAACAGCAGCAACCGAGGCACGAGGCCAAGTGGGCCGTGGACAGCTGGAAGTCCAAAAAGGCTCTCCAGCTCCCGGAATACCCGAACCAAGAGAACCTCCGGGCGGTGCTCAAGAGCCTGGAAGCGTTCCCTCCCATCGTCTTCGCCGGAGAGGCTCGCAACCTTGAGGAGCGCCTCGCCGCCGCCGCCGCGGGGAACGCGTTCCTACTACAGGGCGGAGACTGCGCCGAAAGCTTCAAGGAGTTTAATGCCAACAACATCCGCGACACCTTCAGAATCCTCCTCCAGATGAGTGTGGTTATGATGTTCGGTGGCCAGATGCCCGTTATTAAGGTGGGACGTATGGCGGGTCAGTTCGCGAAACCGAGATCGGAGCAGTTGGAGGAGAAGAACGGAGTGAAACTCCCCAGTTACAGAGGCGATAACGTGAATGGAGATGCGTTCGAAGAGAAAGCCAGAATTCCAGATCCTGAAAGGATGATTAGAGCGTATAGTCAATCCGCTGCCACTCTGAATCTTCTCAGGGCATTCGCCACTGGAGGCTACGCCGCTATGCAAAGGGTTGGTCAATGGAATTTGGACTTCACAGAGCACAGCGAACAAGGAGACAGGTACCTAGACTTTGCACACCGAGTGGATGAGGCCCTTGGTTTCATGGCTGCTGCAGGCCTCACGGTGGAGCATCCTATAATGAAAACAACTGAGTTCTGGACTTCACATGAATGTCTGTTATTGCCATATGAACAATCACTCACCAGGTTGGATTCAACTTCTGGTCTCTACTATGACTGCTCCGCGCATATGCTTTGGGTTGGGGAACGGACTAGGCAGCTGGACGGTGCTCATGTTGAGTTTCTAAGAGGAGTTGCCAATCCTCTCGGAATCAAGGTAAGTGATAAGATGGATCCAAATGAGCTTGTTAGACTGATCAACATTTTGAACCCCCAAAACAAACCCGGAAGAATAACTGTGATCACGAGGATGGGAGCTGAAAATATGAGGGTCAAGCTTCCACATCTGATCAGGGCAGTACGCAGAGCTGGACATACCGTAACTTGGGTCAGTGATCCTATGCATGGAAACACCATAAAGGCTCCGTGTGGACTCAAAACTCGCCCCTTTGATGCAATCAGGGCGGAGGTGAAAGCATTCTTCGACGTGCATGAACAGGAAGGAAGCCACCCAGGTGGGGTTCATCTAGAGATGACGGGTCAGAATGTGACTGAGTGCATTGGAGGGTCGAGAACTGTTACCTTTGATGATCTGGGTTCACGTTACCACACACACTGTGATCCCAGGCTTAATGCTTCGCAATCTCTTGAGCTTGCTTTCATAATTTCTGAACGCCTCCGCAAGCGTAGGATCGGATCGGATCGCGGCAGCATCTTTTCTCTGTAG 1572 0.5223 MATAASNSLFQTKSILPTHPILPSSTTQCYSVRGSRPKPRPIQSVQAADNSVNVVTDGKQQQPRHEAKWAVDSWKSKKALQLPEYPNQENLRAVLKSLEAFPPIVFAGEARNLEERLAAAAAGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVMMFGGQMPVIKVGRMAGQFAKPRSEQLEEKNGVKLPSYRGDNVNGDAFEEKARIPDPERMIRAYSQSAATLNLLRAFATGGYAAMQRVGQWNLDFTEHSEQGDRYLDFAHRVDEALGFMAAAGLTVEHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVRLINILNPQNKPGRITVITRMGAENMRVKLPHLIRAVRRAGHTVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVKAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLGSRYHTHCDPRLNASQSLELAFIISERLRKRRIGSDRGSIFSL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01663 523 Pfam Class-II DAHP synthetase family 69 505 IPR002480 GO:0003849|GO:0009073
Vian4g01663 523 Gene3D Aldolase class I 255 510 IPR013785 -
Vian4g01663 523 FunFam Phospho-2-dehydro-3-deoxyheptonate aldolase 258 510 - -
Vian4g01663 523 SUPERFAMILY Aldolase 60 509 - -
Vian4g01663 523 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 42 515 IPR002480 GO:0003849|GO:0009073
Vian4g01663 523 NCBIfam 3-deoxy-7-phosphoheptulonate synthase class II 69 512 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01663 Vian-Chr4 32597067 32600687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01663 K01626 - gmx:100797019 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01663 4 32597067 32600687 Vian4g01663 4 32597067 32600687 ECH
Vian7g00029 7 1445019 1449126 Vian4g01663 4 32597067 32600687 PCT