Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01933 ATGGAGGAGAACACGGAGAAGGTGAAGGGTGAGGCGCTGCAGATAATCGAAGCCTTTGAGGTTCTGCCAAAGCTCGTGGTTTTCGATCTCGATTACACTCTCTGGCCTTTCTACTGTGAGTGTCGATCGAAGCGTGAAATGCCCTCTGTCTATCCTCACGCCAAAGGCATATTGTTAGCGCTCAAAGAGAAAGGCATCGACGTTGCAATCGCCTCTCGCTCACCAACCGCTGACATAGCAACAGCTTTCCTCAACAAATTGGGCCTCTCCTCACTCTTCGTCGCACAGGAAATATATTCCAGTTGGACACATAAAACAGATCATTTTCAGAGGATTCATTCGAGGACCGCTCTCCCCTTCAACTCCATGCTCTTTTTCGATGATGAGAATAGGAACATCCAATCGGTCTCTAAAATGGGAGTGACTAGCATTTTGGTTGGAGATGGGGTAAATCTTGGGTCGTTAAGGGAAGGTCTTATTCAATTCTCTCGAAACTGGAACGCTTCACAGAAGAACAAGCAGAAATGGCTTTCCAAGTACTCTAACAAGCCAGATACTTCCAACCCTGCTGCATGA 576 0.4705 MEENTEKVKGEALQIIEAFEVLPKLVVFDLDYTLWPFYCECRSKREMPSVYPHAKGILLALKEKGIDVAIASRSPTADIATAFLNKLGLSSLFVAQEIYSSWTHKTDHFQRIHSRTALPFNSMLFFDDENRNIQSVSKMGVTSILVGDGVNLGSLREGLIQFSRNWNASQKNKQKWLSKYSNKPDTSNPAA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01933 191 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 5 171 - -
Vian6g01933 191 Pfam Acid Phosphatase 22 164 IPR010036 GO:0016791
Vian6g01933 191 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 3 172 IPR010036 GO:0016791
Vian6g01933 191 SFLD C1.5.2: MDP Like 5 171 - -
Vian6g01933 191 CDD HAD_MDP-1_like 23 146 IPR035679 -
Vian6g01933 191 Gene3D - 4 169 IPR023214 -
Vian6g01933 191 FunFam Magnesium-dependent phosphatase 1 8 168 - -
Vian6g01933 191 SUPERFAMILY HAD-like 23 153 IPR036412 -
Vian6g01933 191 NCBIfam HAD-IIIC family phosphatase 24 139 IPR010033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01933 Vian-Chr6 36542963 36543801 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01933 K17619 - gmx:100305763 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03029 1 50074548 50076486 Vian6g01933 6 36542963 36543801 PCT