Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01917 ATGCATGAGACAGATGACAATAGAGCAAGAACAAAGTTTTTCTTCTTTGCACACTTATGCAGTATTTTGTGGTACGCGGTCCCTGGATACTTGTTCACAACGCTCACAAATATCTCATGGGTGTGTTGGATATTCTCCAAGTCAGTTACAGCTCAGCAAATAGGGTCAGGCATGAGGGGGCTTGGAGTTGGAGTCCTCACACTTGATTGGGCTGCTGTGGCATCATTCTTGCTCAGCCCTCTTATATCACCCTTCTTTGTCATTGCCAATGTTTTTGTGGGCTATGCATTGATAGTCTATGTTGTTACTCCTATAGCATATTGGGGCCTCAACGTGTACAATGCCAATAGGTTTCCCATTTTCTCCTCACACTTGTTTACAGCCCAAGGTCAAAGGTACAACATATCTGCCATTGTAGACAATCATTTTGAGTTGAATGTTGCAGAGTATGAAAAGCAAGGTAGAATTCATCTCAGTGTGGTTTTTGCCCTCACTTATGGCTTTGGATTTGCCACCATAGCATCCACTCTCACACACGTGTTCTGCTTCTATGGAAGAGAGATTATGGATCGCTATCGTGCTTCTTCCAACGAGGAAGAAGATATTCACACAAAATTGATGAAAAGATACAAAGACATACCTTCCTGGTGGTTTTATTTATTGTTGGTTGTGACCCTTGTGGTTTCTCTCGCACTATGCATCTTTCTCAACGACCAGGTTCAAATGCCGTGGTGGGGACTTCTCTTTGCTGCAACCCTAGCTTTCGGATTTACCCTTCCTATTAGCATCATCACTGCCACCACAAACCAGACACCAGGATTGAATGTCATCACTGAGTATGTCTTTGGTCTCATTTACCCGGGAAGACCGATTGCAAATGTATGCTTCAAAACTTTTGGTTACATCAGCATGGCCCAGGCTGTCTCTTTCCTCGCTGATTTCAAACTTGGGCACTACATGAAAATCCCTCCAAGATCAATGTTCTTAATTCAGTTCATAGGTACAATGCTAGCTGGAACCATCAACATTGGGGTAGCATGGTGGTTGCTGAACTCCATAAAGAACATATGTCATGACGATCTCCTTCCAGAAGACAGTCCCTGGACATGCCCAGGTGACCGTGTATTCTTTGATGCATCAGTTATTTGGGGCCTTGTGGGACCAAAGCGGATCTTTGGTTCTCTAGGAAACTACAGTGCATTGAATTGGTTTTTCCTTGGAGGTGCATTGGGACCTATAATTGTTTGGCTATTGCACAAAGCATTTCCAAAAAATTCATGGATTCCACTGATAAACCTCCCAGTTCTCCTAGGAGCAACTGCATATATGCCACCAGCAACACCATTGAACTACAATTCATGGATTTTGATTGGGACAATTTTCAACTTCTTTATCTTCCGTTACAGAAAGAAGTGGTGGCAAAGGCTTGGAGACAACAAAATGCTTGGAGAATTTGACCTTGTTGGTATTCCTCCTGCTCCCAGAGGTCTTCCTCAGATTGAGGTCACGTTTGACATTGATGCCAATGGTATTGTTACCGTCTCTGCCAAAGACAAGTCTACTGGGAAAGAACAACAAATCACCATTCGGTCATCTGGCGGACACTCGGAAGACGAGATTGAAAAGATGGTCAAAGAAGCAGAATTGCACGCTCAGAAAGACCAAGAAAGAAAGGCTCTTATTGACGTTAGAAATAGTGCTGACACTACTATATATAGCATTGAGAAGAGTTTAGGGGAATACAGAGAGAAGATTCCCAGTGAAGTGGCCAAAGAAATTGAGGATGCAGTTTCGGATTTGAGAAAGGCGATATCTGGGGATAATGTTGATGAAATTAAGTCTAAGCTTGACGCTGCAAACAAAGCTGTATCCAAAATTGGGCAGCACATGTCAGGTGGTTCTAGTGACGGTTCCTCAGCCGGTGGTTCACAGGGTGGGGACCAGGCTTCAGAGGCAGAGTATGAGGAGGTCAAGAAGTGA 1980 0.4374 MHETDDNRARTKFFFFAHLCSILWYAVPGYLFTTLTNISWVCWIFSKSVTAQQIGSGMRGLGVGVLTLDWAAVASFLLSPLISPFFVIANVFVGYALIVYVVTPIAYWGLNVYNANRFPIFSSHLFTAQGQRYNISAIVDNHFELNVAEYEKQGRIHLSVVFALTYGFGFATIASTLTHVFCFYGREIMDRYRASSNEEEDIHTKLMKRYKDIPSWWFYLLLVVTLVVSLALCIFLNDQVQMPWWGLLFAATLAFGFTLPISIITATTNQTPGLNVITEYVFGLIYPGRPIANVCFKTFGYISMAQAVSFLADFKLGHYMKIPPRSMFLIQFIGTMLAGTINIGVAWWLLNSIKNICHDDLLPEDSPWTCPGDRVFFDASVIWGLVGPKRIFGSLGNYSALNWFFLGGALGPIIVWLLHKAFPKNSWIPLINLPVLLGATAYMPPATPLNYNSWILIGTIFNFFIFRYRKKWWQRLGDNKMLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGHSEDEIEKMVKEAELHAQKDQERKALIDVRNSADTTIYSIEKSLGEYREKIPSEVAKEIEDAVSDLRKAISGDNVDEIKSKLDAANKAVSKIGQHMSGGSSDGSSAGGSQGGDQASEAEYEEVKK 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01917 659 PANTHER ISP4 LIKE PROTEIN 2 475 IPR004648 GO:0055085
Vian6g01917 659 NCBIfam OPT family oligopeptide transporter 24 476 IPR004813 GO:0035673
Vian6g01917 659 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 465 534 IPR029047 -
Vian6g01917 659 FunFam Molecular chaperone DnaK 535 635 - -
Vian6g01917 659 Pfam Hsp70 protein 476 630 IPR013126 GO:0005524|GO:0140662
Vian6g01917 659 Pfam OPT oligopeptide transporter protein 2 476 IPR004813 GO:0035673
Vian6g01917 659 NCBIfam small oligopeptide transporter, OPT family 9 475 IPR004648 GO:0055085
Vian6g01917 659 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 537 630 IPR029048 -
Vian6g01917 659 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 476 568 IPR029047 -
Vian6g01917 659 Gene3D - 536 632 IPR029048 -
Vian6g01917 659 MobiDBLite consensus disorder prediction 623 659 - -
Vian6g01917 659 MobiDBLite consensus disorder prediction 627 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01917 Vian-Chr6 36398581 36407276 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01917 1 475 Organic Solute Cotransporters AT5G64410 77.731 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01917 - - gmx:100786741 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03063 1 50982467 50986831 Vian6g01917 6 36398581 36407276 PCT