Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01893 ATGGCAGTGCAGTATGAGTGCTGTGATGTGGAGTTTTCAAAACGCGTATTGATAATTGTGCTGCTCGTGATATTCGCTGGATTGATGTCAGGGCTCACTTTAGGCCTCATGTCATTGAGTCTCGTTGATCTTGAGGTCCTTGCAAAGTCTGGAACCCCTCACGATCGCAACAATGCTGGTGAAATTTCTCTCCTTGCCTTATGGAAACTCACCATAACGATATTGCCTGTTGTCAGGAATCAACATTTGTTGCTTTGCACACTCCTAATTTGCAATGCGGTAGCCATGGAGGCCCTTCCAGTTTTTCTGGATAGTCTTGTTGTTTGGTGGGGTGCTATACTGATTGCGGTGACATTAATCCTTCTGTTCGGTGAGATTATACCTCAATCAATTTGTTCTCGGCATGGTTTAGCAATTGGTGCAACAGTGGCTCCAGCTGTTCGTGTTCTTGTATGGATATGTTTTCCTGTTGCTTATCCAATTAGTAAGTTGCTGGACTTTTTGCTGGGGCATCGACATGAAGCCCTTTTCCACAGAGCTGAGTTGAAGACACTTGTAAATCTGCATGGCCATGAGGCTGGAAAAGGTGGGGAACTGACACATCATGAAACAACGATCATTGCTGGAGCACTGGAACTCTCTGAGAAGATAGCCAGCGATGTCATGACTCTCATAACCGAAACATTTTGTGTTGACATTAATTCAAAGCTTGATAGGTATCTGATGAATCTGATAATGGAGAATGGGCATAGCAGAGTCCCAGTCTATTATGAGCAGCCCACAAATATTATTGGACTTATCCTGGTCAAGAATTTATTGACAATTGACCCAGAAGATGAAGCACCAGTGAAAAGTGTGACCTTGCGAAGAATTCCAAGGGGTGGTTCCCAGAGCAGAAAATGGTCCAAAAATATGTACTACGATATTTTGGATATAGATGGAAATTCACTTCAAAAGCTGCCGGAAAAAGAAGAAGCTGTTGGAATAATTACAATGGAAGATGTCATCGAAGAGCTTTTACAGGAGGAGATCTTTGATGAGACGGATCATCATTTTGAAGACTTCTGA 1068 0.4279 MAVQYECCDVEFSKRVLIIVLLVIFAGLMSGLTLGLMSLSLVDLEVLAKSGTPHDRNNAGEISLLALWKLTITILPVVRNQHLLLCTLLICNAVAMEALPVFLDSLVVWWGAILIAVTLILLFGEIIPQSICSRHGLAIGATVAPAVRVLVWICFPVAYPISKLLDFLLGHRHEALFHRAELKTLVNLHGHEAGKGGELTHHETTIIAGALELSEKIASDVMTLITETFCVDINSKLDRYLMNLIMENGHSRVPVYYEQPTNIIGLILVKNLLTIDPEDEAPVKSVTLRRIPRGGSQSRKWSKNMYYDILDIDGNSLQKLPEKEEAVGIITMEDVIEELLQEEIFDETDHHFEDF 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01893 355 Gene3D - 202 347 IPR046342 -
Vian6g01893 355 SUPERFAMILY CBS-domain pair 206 342 IPR046342 -
Vian6g01893 355 Pfam Cyclin M transmembrane N-terminal domain 17 197 IPR002550 -
Vian6g01893 355 PANTHER METAL TRANSPORTER CNNM 3 351 IPR045095 GO:0010960
Vian6g01893 355 ProSiteProfiles CNNM transmembrane domain profile. 8 203 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01893 Vian-Chr6 36207955 36210694 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01893 K16302 - gmx:100799797 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01893 6 36207955 36210694 Vian6g01893 6 36207955 36210694 ECH
Vian1g03079 1 51315988 51320827 Vian6g01893 6 36207955 36210694 PCT