Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01634 ATGGACCGGCCAAATTCGATCCATCACGACGGCGACGTTTTCGTAGATGCGTTTCAACATTTTCCCGCCGAGGGCTCGCCGGAGCCTTCCGATTCGGCTTCCAGGCTTCCGGATCCTGCACCCGAACCTAAGTCATACTATCCGGCTGCCACAATCCGGCGCCGGCCAGTTAGTCGCGGTTTTGCGGATACTCAATCTTCAGGATCTAGCTTGGAGAGCGATTTAGTGAATGGCAATTGGAGAAGTTTCCAACACCGCAGGTGGCATCGAAATCTCAAGAAAGACGAGAATACGGAGAAACCCGATTTGGATGACCCGCAACAAGTTAATGCCTCGACGGAGGAGAACAACGAGGGCTCCACCGTAACTTCAGCTGCGAACGATGATTCAGCTGTCGACTCCGTTGACTCGGCGCCGCGACAAGGTGACTCGTCTTCGAGTTTCCTCGACCTCCCCGCGGGGTTGGCGATTAACTTATTAGGGTTTCAGATTAAGTTAATGTTCATGTTCATAACTTACCCGCTGTTGTTCGTGTTTTATTCATGCATGTTTTTCATGGATCCTTTGGGGACAACGAAGAGGGGCAAGGTTTTCCTTGTAGGGATTTTGAACAGAGGGTGGTGTGGTTTGTTTCGGTGCATTAGGCCTTATGTCAGTAGATGGTTCAAGGAGAACGAATCGGTTTGGAGCGTGGCTTTGCGGTGGGGGTGGGGGGTTTTGTGCTCAGTCTATGTTGGTTGCGTTTTGTTTGGTCTTCTGGTTTCGTCGTTTGTGTTTAGTATGTTGTTGATGAAGTATTTGGTGGAGAAGCCGATTCAGATGAGGGAGGTTTTGAACTTTGATTATAGCAAGCATAGTCCTGTCGCATATGTGCCGATAATGTCGTGTGCCGGTGTTATTGGTGGTATAGGTTCCGAGGATAAGGATGATGATCGGAAGTGGGTGGGTGAACGGTTTATACCTTCTAAGCACAAGGTGCAACTCACTGTTGAGTTAAGAGTGCCAGAGTCAGGATACAACAGAAACCTTGGGATCTTTCAGATCAGGGTAGATTTCCTATTGCCTAATGGTAAAGCTATTGCAAGCTCAAGTCAACCTTGTATGTTAAGATTCAGAAGTCAGCTTATCCGCCTAATCACTACTCTTCTAAAGATTGTTCCTCTTGTTACTGGCTATACATCCGAAACTCAGACTCTGAATGTGAAGATGAGAGGTTTCAAAGAAGGAGATCTACCTACTTCGTGTTTCAAAGTGACCCTTGAGCAACGAGCAGAATATCAACCAGGTGCAGGCATTCCTGAAATATATGATGCATCTCTGATTGTTGAATCGGAACTTCCATTGTTCAAGAGGATTATTTGGCTTTGGAAGATGAGCATTTTTATATGGATCGCGATGATGGCATTCTTCACAGAGTTAATCTTTGCTCTTGTGTGTTGCACGCCTATCATTATTCCGAAAACAAGGCAAAGGCTGGATTCAGCTCGCCGTCCTGCAACCTTAAACCGTCCTCAGGCACTAGATTGA 1527 0.4695 MDRPNSIHHDGDVFVDAFQHFPAEGSPEPSDSASRLPDPAPEPKSYYPAATIRRRPVSRGFADTQSSGSSLESDLVNGNWRSFQHRRWHRNLKKDENTEKPDLDDPQQVNASTEENNEGSTVTSAANDDSAVDSVDSAPRQGDSSSSFLDLPAGLAINLLGFQIKLMFMFITYPLLFVFYSCMFFMDPLGTTKRGKVFLVGILNRGWCGLFRCIRPYVSRWFKENESVWSVALRWGWGVLCSVYVGCVLFGLLVSSFVFSMLLMKYLVEKPIQMREVLNFDYSKHSPVAYVPIMSCAGVIGGIGSEDKDDDRKWVGERFIPSKHKVQLTVELRVPESGYNRNLGIFQIRVDFLLPNGKAIASSSQPCMLRFRSQLIRLITTLLKIVPLVTGYTSETQTLNVKMRGFKEGDLPTSCFKVTLEQRAEYQPGAGIPEIYDASLIVESELPLFKRIIWLWKMSIFIWIAMMAFFTELIFALVCCTPIIIPKTRQRLDSARRPATLNRPQALD 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01634 508 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 141 506 IPR009617 GO:0019915
Vian6g01634 508 MobiDBLite consensus disorder prediction 1 15 - -
Vian6g01634 508 MobiDBLite consensus disorder prediction 1 75 - -
Vian6g01634 508 MobiDBLite consensus disorder prediction 104 131 - -
Vian6g01634 508 MobiDBLite consensus disorder prediction 60 75 - -
Vian6g01634 508 MobiDBLite consensus disorder prediction 91 146 - -
Vian6g01634 508 Pfam Putative adipose-regulatory protein (Seipin) 252 468 IPR009617 GO:0019915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01634 Vian-Chr6 33889337 33891704 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01634 K19365 - gmx:100796452 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01634 6 33889337 33891704 Vian6g01634 6 33889337 33891704 ECH
Vian6g01634 6 33889337 33891704 Vian1g03355 1 55814307 55816742 ECH
Vian1g03355 1 55814307 55816742 Vian6g01634 6 33889337 33891704 PCT