Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00983 ATGAGGTGCTTTCTACCATGTTTTCGCACTTCTAAACGTCGTAACCAATTGCGTTCTAAGGATGCAACTCTCACACAAACCCATGTGGGGGAAGGAGCTGTTGAACCTCTTGCACGGCAGAAGACTGCTGTTGAAGAACTCATTGATTGCATAGCAGAATCAAACTATCTTTACGCTTTCAGAATAAGAAATGAAGAGCAATCAAATAATAACAGTGTTGAAACCAAGGAAGCACCTCAGATAGATGAGAAAAGGAATGACCGTGAAAGAGATGATGAGATCAGTGAAAGATTGCATCAGGAAGAGTCTTCGGAGTCACTGTTCTCTCTGTCTGTTTGTTCAAGAAAAAAAGTTTCAGATGCCGAAACAGTCGAGCCTGAAGTTAATAGTCCGATGCAATTATGCACAAGAGAGGTACCTGAAGCATTTGGGTCATCCCCAAATGCGCCACTTCAAAATATTTCGTCCGTTCTGAGTCCAGTTGAAGAATTTACCCATGAAAATCCATCCAAGGAGAAGGACGATAAGGAAGGAGAAAAAGGGAAAGTGACTCACCCTGTTCTACAGTATAGGTATAGAGATTGCCCAGATGACGAATACGACGACGTTAATTTAGATACAAGTGAATTTGATTCTACGCTAGAAAATGACGATCCTCAGAGTGAGAAGAGAAAAAGGGGGAAAGAAGGCGCTGTTGTTAAACGAACATGGGTTCAAGAAGAGTCTTCGGAATCTCTGTTTTCTCTGTCTGCTGATTCTAGAATACGAATTTCATCAGCAGAAGCAGAGAATGAAGTGGACAGTCTAGTGTCAGCGAACATCACACAAAAAGAAGCACAAGGGAGGATTCCAGATGTTTGCTCATTGCTGAATCCAATCGAGAGGGTAGTGAAAGCAAGAGAGGTGCATCCACTGAAGATCGATAAAGAAAACATAAACTTGGTAGTGCAAGATGGTAACATACCCGTTAGTTCAGAGCCTGCTTTGAAGCTGTCAAACTGCAAGGGTAGGCAATTCAGTGACAGCAAAAGAAGGGAAGAAATTGGGGTAGAGACCAGCCTCTCTAGCTGGTTGGTTGAATCGGAAAGCACGCCTATTTCCATTAATAGTAACAGTTGTGTGGGAGAACATACACCAAAAGGAAGAAGAGGTTCACCGTGGAGTCACGAGGATAGGCCAATTTTGGGAGCCTTAACAGTTGAAGAGATCAAGATGTATTCTTTATCTGCATCTTCAAGAAGGTCTAGAAGCCGGAGTCCCGACGACACACCCATCATAGGTACTGTTGGAAGCTACTGGACTCACACAGAACAGAGCATGGATTTGCAGTTCAACAAAAAAGGAAAGGATGTAACACCAAAGAGGAGTACAACGGCATTACAAACAAGACTAGAAGGTGCATTTGATGCTAGTGTATCAATGGGTTCAACGGCGTGA 1437 0.4301 MRCFLPCFRTSKRRNQLRSKDATLTQTHVGEGAVEPLARQKTAVEELIDCIAESNYLYAFRIRNEEQSNNNSVETKEAPQIDEKRNDRERDDEISERLHQEESSESLFSLSVCSRKKVSDAETVEPEVNSPMQLCTREVPEAFGSSPNAPLQNISSVLSPVEEFTHENPSKEKDDKEGEKGKVTHPVLQYRYRDCPDDEYDDVNLDTSEFDSTLENDDPQSEKRKRGKEGAVVKRTWVQEESSESLFSLSADSRIRISSAEAENEVDSLVSANITQKEAQGRIPDVCSLLNPIERVVKAREVHPLKIDKENINLVVQDGNIPVSSEPALKLSNCKGRQFSDSKRREEIGVETSLSSWLVESESTPISINSNSCVGEHTPKGRRGSPWSHEDRPILGALTVEEIKMYSLSASSRRSRSRSPDDTPIIGTVGSYWTHTEQSMDLQFNKKGKDVTPKRSTTALQTRLEGAFDASVSMGSTA 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00983 478 MobiDBLite consensus disorder prediction 216 231 - -
Vian6g00983 478 MobiDBLite consensus disorder prediction 165 198 - -
Vian6g00983 478 MobiDBLite consensus disorder prediction 161 231 - -
Vian6g00983 478 MobiDBLite consensus disorder prediction 77 102 - -
Vian6g00983 478 MobiDBLite consensus disorder prediction 199 215 - -
Vian6g00983 478 MobiDBLite consensus disorder prediction 69 102 - -
Vian6g00983 478 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 168 468 IPR039300 GO:0007142
Vian6g00983 478 MobiDBLite consensus disorder prediction 369 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00983 Vian-Chr6 27068130 27069997 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00983 - - pvu:PHAVU_006G104900g 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01736 3 19645979 19647345 Vian6g00983 6 27068130 27069997 ECH
Vian2g02232 2 42399662 42401312 Vian6g00983 6 27068130 27069997 ECH
Vian6g00983 6 27068130 27069997 Vian6g00983 6 27068130 27069997 ECH
Vian6g00983 6 27068130 27069997 Vian3g01736 3 19645979 19647345 PCT