Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01736 ATGGGTTGCTTTTTTGGTTGTTTTGGTTCCTCCAAACACTCAAACAACAGGCGCAAGGTTCTTAGAAATGGTAGTAGCAATGGCAAGCAAGAGCAACCTACTGTCTCTTTGGTTCCGGATTGCTCCAAAAATGCCGTTAACCCTATACCACAACTCCTTGAGAAAAGTGCGGAGCAACTGAGTGTTAGTAGCAGAAAGAAAGTGACATTTGATTCAAACGTGAAGACCTATGAACCTTCTTTGGTGGATGAAGTTGGAGAGAGGAAGAATGAGGATGGTGGAAAGGAGGAAGCTTTGGTTCATCCAAAGACATCTTCCTCTGAAGATAATAGTTGTGTTTCTTCAACGGGGTCTTACCCACCCAACCATAGGTACCAGAATTGCCGGGACAGTGAGGATGAGGAGGAAGAGATTGATTATGAGGACAGTGATCTTAGTGATGAGGATGATGATGATGTCATCAGAGAAGAGTGCAAAGAATTCGGGGAGGACTTTGGAGAAGATGGAACGGTAGCAACTGCTGCTGCTGATCATGTGTTTGCTGAAGAGGTTGATGTGAAGTCAATCGAGTCCAACCTCAATGCCAGAGACAGAAGTGTTTATGTTCATCCTGTACTGAAACCAGTGGAGAATCTCACTCAGTGGAAAGTTGTGAAGTCTAAGAAAACACCCTTAAGACCTCAGAAAGAAAATGAGTTTGGGGAAGGTGTGGAAGAATCACCTTTCAGCTTGAAATCAGAAAGTGACACACCAAAGAAGTTGAACCAGGAGATCCCTGTTGATGCCAGCCTGTCAAATTGGTTGGTCTCACCAATGACTACACCTGCTAACAACAAGGCTGGCTCAGCGACTTTATTTCCTGGTACCCCTGACAGGAGCACCCCACAAAGTCCATATTCTGTGTTAAGTCACGAAGATAGGCCAATTTTAGGTGCATTGACATTAGAGGAGATCAAACAATTTTCGGCTACTTCTTCTCCAAGAAAGTCACCTAGTAGGAGTCCAGATGAAATGCCTATTATCGGCACTGTTGGGACCTACTGGAATTTTGCAGCCTCATCGGAAGGTTCTGGCTCAGCCTCTTCCTTTAAAGGAATTCCGAACTCAACAAGCAAGTACAGAGAGGTAAAGATGAGGTGA 1140 0.4456 MGCFFGCFGSSKHSNNRRKVLRNGSSNGKQEQPTVSLVPDCSKNAVNPIPQLLEKSAEQLSVSSRKKVTFDSNVKTYEPSLVDEVGERKNEDGGKEEALVHPKTSSSEDNSCVSSTGSYPPNHRYQNCRDSEDEEEEIDYEDSDLSDEDDDDVIREECKEFGEDFGEDGTVATAAADHVFAEEVDVKSIESNLNARDRSVYVHPVLKPVENLTQWKVVKSKKTPLRPQKENEFGEGVEESPFSLKSESDTPKKLNQEIPVDASLSNWLVSPMTTPANNKAGSATLFPGTPDRSTPQSPYSVLSHEDRPILGALTLEEIKQFSATSSPRKSPSRSPDEMPIIGTVGTYWNFAASSEGSGSASSFKGIPNSTSKYREVKMR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01736 379 MobiDBLite consensus disorder prediction 223 252 - -
Vian3g01736 379 MobiDBLite consensus disorder prediction 354 379 - -
Vian3g01736 379 MobiDBLite consensus disorder prediction 12 42 - -
Vian3g01736 379 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 377 IPR039300 GO:0007142
Vian3g01736 379 MobiDBLite consensus disorder prediction 354 369 - -
Vian3g01736 379 MobiDBLite consensus disorder prediction 59 76 - -
Vian3g01736 379 MobiDBLite consensus disorder prediction 277 301 - -
Vian3g01736 379 MobiDBLite consensus disorder prediction 132 151 - -
Vian3g01736 379 MobiDBLite consensus disorder prediction 321 340 - -
Vian3g01736 379 MobiDBLite consensus disorder prediction 12 41 - -
Vian3g01736 379 MobiDBLite consensus disorder prediction 104 125 - -
Vian3g01736 379 MobiDBLite consensus disorder prediction 59 151 - -
Vian3g01736 379 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01736 Vian-Chr3 19645979 19647345 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01736 - - gmx:100805024 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01736 3 19645979 19647345 Vian3g01736 3 19645979 19647345 ECH
Vian3g01736 3 19645979 19647345 Vian6g00983 6 27068130 27069997 ECH
Vian2g02232 2 42399662 42401312 Vian3g01736 3 19645979 19647345 ECH
Vian2g02232 2 42399662 42401312 Vian3g01736 3 19645979 19647345 PCT
Vian6g00983 6 27068130 27069997 Vian3g01736 3 19645979 19647345 PCT