Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01729 ATGGCCGGAAAGTACATTCCACGATCGAAATCGCGAGCCACTCTGTTCCTCTTCCTTCTCGCTTTCTCTCTCCTCTTCATCCTCTTCTCTCTCTCTCCTCTCCGCTCTCCCTCCCTTTCTCCCACCAATGTCCGCGTTCCCGATGCCGAAACTTCCTTCCTCGTCTCCCTCGACCGTTTCCTCACCGCCACGCCGTCCTCCCTTTCCGACGACACCGCGCACGACGGACAAGAGGACCTCGTCGCCAAGCTCGACGACGCCGTTTATCGCTCCGAGATGGACAGGCTGTACACCGATCCTTACTACCCGCTCTCCCTTCCCCTTAGGGTTTACGTCTACGACATGCCCCCAAAGTTCACCTACGATTTGCTCTGGCTCTTCAAAAGGACCTACCGGGAAACCTCCAATCTCACCTCCAATGGAAGTCCCGTTCACCGTCTCATCGAACAGCACTCCATTGATTACTGGCTCTGGGCGGATCTCATCGCACCCCAATCGAAGAGGCTCTTGAACAGTGTCATCAGGGTTCAACGACAGGAGGAGGCTGATTTGTTTTACGTACCCTTCTTTACCACTATCAGCTTCTTCCTCATGGAAAAACAACAATGCAAGGCCCTTTATAGGGAAGCTTTGAAGTGGATCACTGATCAACCTGCATGGAAGCGCTCTGGTGGTAGAGATCACATAATCCCTGTGCATCATCCCTGGTCTTTTAAGTCTGTTCGAAAAGACGTGAAGAAAGCAATATGGTTGTTGCCTGATATGGATTCCACAGGGAACTGGTACAAGCCAGGACAGGTTTTTCTGGAGAAGGACCTGATTCTTCCATATGTTCCCAATCTTGATTTATGTGATGCCAAGTGTTTGGCTGAGACAAATCCTAAGAGAAATATGCTGCTTTTCTTTCGGGGCCGGCTCAAGAGAAATGCGGGAGGAAAGATACGCTCTAAACTTGTCGACGAATTACGTGGGGCTGATGGTGTGAGTATAGAGGAGGGAACAGCTGGGGAGGGGGGAAAAGAAGCTGCTCAAATTGGCATGCGCAAGTCTCTGTTTTGCCTAAGCCCAGCTGGCGACACTCCATCCTCTGCTAGATTATTTGATGCCATTGTTAGTGGATGCATTCCAGTTATAATAAGTGATGAGCTGGAGCTTCCTTTTGAAGGAATACTTGATTACAGGAAGATAGCATTGTTCATTTCCTCTAATGATGCCCTAAAGCCAGGTTGGCTTTTGAATTATTTGAAAGGCATCAGACCTGCTCGTATCAAAGAAATGCAACAAAATCTTGCTAAGTATTCAAGGCATTTCCTGTATTCTAGTCCAGCTCAGCCGTTGGGTCCTGAAGACTTGGTTTGGAAAATGATGGCTGGGAAGTTGGTGAACATCAAGCTTCACACAAAAAGATCTCAACGTGTAGTGGAAGGATCTAGAAAACTGTGTACTTGTGATTGCAGGCCTGCCAATATTACTAAAACTGCTTCAATTATTTCTTGA 1497 0.4816 MAGKYIPRSKSRATLFLFLLAFSLLFILFSLSPLRSPSLSPTNVRVPDAETSFLVSLDRFLTATPSSLSDDTAHDGQEDLVAKLDDAVYRSEMDRLYTDPYYPLSLPLRVYVYDMPPKFTYDLLWLFKRTYRETSNLTSNGSPVHRLIEQHSIDYWLWADLIAPQSKRLLNSVIRVQRQEEADLFYVPFFTTISFFLMEKQQCKALYREALKWITDQPAWKRSGGRDHIIPVHHPWSFKSVRKDVKKAIWLLPDMDSTGNWYKPGQVFLEKDLILPYVPNLDLCDAKCLAETNPKRNMLLFFRGRLKRNAGGKIRSKLVDELRGADGVSIEEGTAGEGGKEAAQIGMRKSLFCLSPAGDTPSSARLFDAIVSGCIPVIISDELELPFEGILDYRKIALFISSNDALKPGWLLNYLKGIRPARIKEMQQNLAKYSRHFLYSSPAQPLGPEDLVWKMMAGKLVNIKLHTKRSQRVVEGSRKLCTCDCRPANITKTASIIS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01729 498 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 28 437 IPR004263 GO:0006486|GO:0016757
Vian5g01729 498 Pfam Exostosin family 107 415 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01729 Vian-Chr5 39651782 39656666 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01729 - - gmx:100784931 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01729 5 39651782 39656666 Vian10g00128 10 1085123 1088752 ECH
Vian5g01729 5 39651782 39656666 Vian5g01729 5 39651782 39656666 ECH