Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01409 ATGTTCAACTTAGAGGGTTTTATTCCTAAGCTATGTCAATTGGCTCAAGAAGTGGGGGAAGATGAACGAGCTTTGCGTCTACGTTCAGCTGGACTACAAGCTCTATCCTATATGGTGCGTTTCATGTGTGAGCACTCACATCTTTCCATGGTTTCAGATGAAATTATATCAGTGACTTTGGAGAATTACACGAGTCTCCAATCCAACTCCAAATCTTCCATGGAAAATAAGCTGAATTCTGAGTCACTGGACCCTATAGTACAGGGATTTCCTAAAGTAGAAGACCCTTTAACAGATATCACTAAGAAGGATCCTTTGTTGCTGAAAGCTGTGACTGGAAATGAGATGAACATTGTGTTGGATACTGCTAAAGATCCTACATACTGGTCAAAGGTCTGCTTGTATAATATGGTCAAATTAGCAAGAGAAGCTACAACTTTACGGCGTGTTCTTGAACCTCTTTTTCATTATTTTGATTCTGAAAATCAATGGTCTTCTGAAAAAGGAGTTGCTGCTCATGTTTTGATTTACTTACAATCTCTTTTAGCAGAATCAGGAGATAATTCCTGCCTTCTGTTGTCCGTTTTGGTCAAGCACTTGGATCATAAAAATGTTGCTAAGCAGCCGATCCTTCAGATTAATATTATTAACGCAACAACAAAACTTGCACAAAATGTGAAGCAACAGGCTTCGGTTGCAATACTTGGTGCAATATCTGAACTAATTAAACATTTAAGGAAGACTCTGCAAAATTCAGCCGAAGCTTCCAGCTTTGGAAATGATGGGTTTAAGTTGAATACTGAACTTCAATTTGCCTTGGAAATGTGTATATTGCATCTTTCCAACAAGGTTGGGGATGTAGGACCCATTCTTGATTTGATGGCTGTGGTGTTAGAGAATATCTCAACTACAACTACCATTGCAAGAACGACAATTTCTGCTGTTTATCAAACTGCAAAGCTAATCACGTCCATCCCTAATGTATCATATTACAAGAAGGCTTTCCCTGATGCTTTGTTTCATCAATTGCTCCTGGCCATGGCTCACTCTGATCATGAAACCCGAGTTGGAGCTCATCGCATCTTTTCTGTAGTGCTTATTCCATCACCATTTTCTCCTCAGTTAGACCAAATAACAAAGATGTCTGAGAAGGTATCAAGCGAAAGCTTCTCCATTCAGCATGAAAATCTTTTAGGAGCAGAGTATATGAGTGGGAAACACGCGGAAGGAAAGGCAGTAGTTGGTGTGAGTGAGAAATATGCAATTCGTCCATACCATGTTCACATCTTTCCTGGGGCTCTAATGGATGGAAAACATGAGCTAAGCTCTTTTCGGTTAAGCAGTCACCAAGTGAGTCTCTTGCTTTCTTCAATCTGGATTCAGGCAACCTCTATGGATGGTGGCCCTGCAAATTTTGAGGCAATGGCTCACACTTATAGCATTGCTTTATTGTTCACTCGTTCAAAGACATCCAGTTACATGGCTTTAGTAAGATGTTTCCAACTGGCATTTTCCCTAATGAGCCTCTCTTTGGATCAAGAAGGAGGTTTGCAACCATCTCGCAGGAGGTCTCTTTTCACTTTAGCATCATACATGCTTATATTCTCAGCCAGGGCAGGGAATTTCCCTGAGCTAATTCCAAAAGTTAAAGCATCCTTGACAAATTTAACTGTAGATCCTTTCCTTGAGTTGGTCGATGATGTCAAGCTGTGTGCTGTTTATACAGAATCAGAGAAGATAGTTTATGGATCTAAGGAAGATGATGTTTCAGCTATGAAGACACTGTCAGCAATTAAATTGGATGATAAGGAATTGAAAGAGACTGTAATATCATTCTTCCTGACTAAATTTTCAGAATTATCAGAGGATGAGTTGTCGACCATAAAAAAACAACTTGTACAAGGGTTTTCCCCTGATGATGCCTATCCACTGGGACCTCCTTTGTTTATGGAGACACCAGTGCAGTCTTCTCCACTTGCTCAGATTGAGTTCCCAGATTTTGATGAGATTGTGGCTTCGGCAGCTTTGATGGATGAAGAGGCCCGGCCTGAACCTAGTGGAAGTCAGTCAGATCGTAAATCATCACTATCTAGCAATAACCCAGACATTCTAAGTGTTAATGAACTCTTACAATCGGTATTGGAAACTGCACGACAGGTGGCTAGTTTTCCCATTTCATCAACTCCTGTGCCTTATGACCAAATGAAGAACCAGTGTGAGGCACTTGTAACAGGAAAACAAAAGAAGATGTCAGTTCTTCACAGTTTCAAGCACCAGCAGGAAACTAGGGCAATAGTTCTTTCAAGTGAAATTGAAATGAAAGTTTCCCCTTTGCCAATTAAGACACTGGATTATTCAGAAGGTGATCTGAAGTTGGTGAGTCAGGAACAATTTCAAGCACAATATCAAGTTCGCCCCTGTTCATTTGATTTTGGACAGCATCATTCTTTAAAGCTACCACCTGCAAGCCCCTTTGATAAATTCTTGAGAGCTGCTGGATGCTAG 2505 0.4052 MFNLEGFIPKLCQLAQEVGEDERALRLRSAGLQALSYMVRFMCEHSHLSMVSDEIISVTLENYTSLQSNSKSSMENKLNSESLDPIVQGFPKVEDPLTDITKKDPLLLKAVTGNEMNIVLDTAKDPTYWSKVCLYNMVKLAREATTLRRVLEPLFHYFDSENQWSSEKGVAAHVLIYLQSLLAESGDNSCLLLSVLVKHLDHKNVAKQPILQINIINATTKLAQNVKQQASVAILGAISELIKHLRKTLQNSAEASSFGNDGFKLNTELQFALEMCILHLSNKVGDVGPILDLMAVVLENISTTTTIARTTISAVYQTAKLITSIPNVSYYKKAFPDALFHQLLLAMAHSDHETRVGAHRIFSVVLIPSPFSPQLDQITKMSEKVSSESFSIQHENLLGAEYMSGKHAEGKAVVGVSEKYAIRPYHVHIFPGALMDGKHELSSFRLSSHQVSLLLSSIWIQATSMDGGPANFEAMAHTYSIALLFTRSKTSSYMALVRCFQLAFSLMSLSLDQEGGLQPSRRRSLFTLASYMLIFSARAGNFPELIPKVKASLTNLTVDPFLELVDDVKLCAVYTESEKIVYGSKEDDVSAMKTLSAIKLDDKELKETVISFFLTKFSELSEDELSTIKKQLVQGFSPDDAYPLGPPLFMETPVQSSPLAQIEFPDFDEIVASAALMDEEARPEPSGSQSDRKSSLSSNNPDILSVNELLQSVLETARQVASFPISSTPVPYDQMKNQCEALVTGKQKKMSVLHSFKHQQETRAIVLSSEIEMKVSPLPIKTLDYSEGDLKLVSQEQFQAQYQVRPCSFDFGQHHSLKLPPASPFDKFLRAAGC 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01409 834 SUPERFAMILY ARM repeat 27 385 IPR016024 -
Vian5g01409 834 PANTHER PUTATIVE, EXPRESSED-RELATED 1 834 - -
Vian5g01409 834 MobiDBLite consensus disorder prediction 679 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01409 Vian-Chr5 36741176 36747714 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01409 K21842 - gmx:100817330 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00304 11 2829093 2842733 Vian5g01409 5 36741176 36747714 PCT