Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00304 ATGGGGGTTATGTCCAGGCGGGTCGTGCCCGTCTGTGGTAACCTCTGTGTGTTTTGTCCTTCTCTGCGTGCAAGATCAAGGCAACCGGTGAAACGTTACAAGAAGTTGATGGCTGATATATTCCCGCGTAATCAGGTTGCTGAGCCTAACGACAGGAAAATTGGAAAGCTATGTGAGTATGCTTCTAGGAATCCAATGAGAATTCCTAAGATTACTGACAACTTGGAGCAAAGATGTTATAAGGATTTGCGTCATGAAAACTTTGGTTCGGTGAAAGTGGTCTTGTGCATATATAGGAAACTGTTATCGACATGTAAGGAGCAGATGCCGCTGTATGCCAATAGCTTATTAGGGATCCTTCGAACGCTTCTAGAGCAAACTCGTTCAGAGGAAATGCGGATCTTAGGTTGCAAGACTCTTGTAGAATTTACAGATTGCCAGACAAATGGTACATACATGTTCAACTTAGAGGGTTTTATACCAAAACTATGTCAATTGGCTCAAGAAGTGGGAGATAATGAACAAGCTCTTCTTCTACGATCAGCTGGCCTACAAGCGCTCTCCTACATGGTGCAGTTCATGAGAGAGCACTCACATCTTTCCATGGATTTTGACCAAATTATATCAGTGATTTTGGAAAATTTCACGGATCTCCAATCCAAATCCAATCTTGCCAAAGTAGAGAAATTGAATTCACAATCTCAGAGCCAATTGGTCCAACAATTTCCCAAAGGAGGAGACCTACATTCTTTATCAGATATCAGTAAGAAGAATGCTTCCTTACTTAATGGTGTGACAGGAACTGAGACAGAACCCAAGTTAGATACTGCTAAAGATCCTGCTTATTGGTCAAAGATTTGCTTGTATAATATGGCCAAATTGGCCAAGGAAGCTACAACTGTGCGGCGTGTCCTTGAACCATTTTTTCATAACTTTGATGCTGAAAACTACTGGTCTTCTGAAAAGGGAGTTGCTTCTTGTATTTTGCAGTATTTGCAATCTCTTCTAGCAGAATCAGGTGATAACTCCCATCTTCTGTTGTCCATTTTGGTCAAGCACTTGGATCATAAAAATGTTGCTAAGCAGCATATCCTTCAGATTGATATTATTAAAACCACCACGCAGCTTGCACAAAATGTGAAGCAGCAGGCTTCAGTTGCAATCATTGGTGCAATATCTGATCTCGTTAAACATTTAAGGAGATGCCTGCAAAATTTAGCTGAAGCATCCAGCATTGGAGATGCTACATATAGGTTGAATACTGAACTTCAGTCCGTCTTAGAAATGTGTATACTACAACTTTCAAAGAAGGTTGGGGATATAGGACCAATTCTTGATTTGATGGCTGTGGCACTGGAGAATATCTCAGTTACTACCATTACAGCAAGATCGACAATCTCTGCTGTCTATCAAACAGCAAAATTAGTCACTTCCATTCCAAACGTGTCATATCACAATAAGGCTTTCCCTGATGCCTTGTTTCATCAATTGCTCCTGGTCATGGTTCATCCTGACTACGAAACACAAATTGGAGCACACAAGATCTTCTCTTTGGTGCTTACGCCATCCATGGTGTCTCCTTGGTTGGACCACAAAACAATGACTGCTCATAAGGCACCGAATGATTGCTTCTGCAATCCGCCTGAAACTTTTTCTGGAGATGAAAACTGGAACGGAAAACTTGAAGAAGAAAAGACAATATCTGGTGTCAAAGGGAAGAAATATGCAATTCATCCATATAGGGGCTACAGCTTTTCTCCCAAGCTAACTGATGGAAACGAGGATCAAAGTTCTCTTAGGCTAAGCAGTCATCAAGTCAGTCTTCTGCTTTCTTCAATCTGGGTCCAGGCAACATCTGTGGGAAATGGCCCTTCAAATTATGAGGCAATGGCACACGCCTATAGCATTGCTTTATTATTTACTTGTTCTAAGGTATCCAGTCACATGGGTTTAGCAAGAGCCTTTCAACTGGCACTTTCCCTCAGGAGGGTCTCTTTGGACCAACAAGGAGGCTTACAACCATCTCGTAGGAGGTCCCTTTTTACCTTGGCTTCATATATGCTAATCTTCTCTGCCAGGGCTGGCAATCTCCGTGATCTAATTCCAATAGTTAAAGCTTCTCTGACCAAGGAAACAGTAGATCCTTTTCTTGAATTGGTTGATGATATCCGACTGCTGGCTGTCTGTAAGGAAATGGAGAAGATAACTTATGGATCTGAGGAAGATGAGGCGGCTGCTGTGAAGTCTCTTTCAGCTGTAGAATTGGATGACAAGCAGTTGAAAGAGACCGTAATATCGTACTTTATGACTAAATTTTCAAAACTGTCTGAGGATGAACTGTCTAGCATAAAGAATCAACTTGTACAGGGATTTTCCCCCGATGATACATATCCATTAGGACCTCTGTCATTTATGGAGACATCAAGACCATGTTCTCCTCTTCCTCTGATTGAACTCCCAAGTTTTGACGAGATGATGATTCCGGATGATTTGACGGAGATAGAGACTGGACCTGAGCATAGTGGAAGCCAGTCAGATCGCAAAACATCACAGTCAACCAACCACCCTGATGTTCTAAGTGTTAATCAACTATTAGATTCGGTTTTGGAAACTGCACGGCAAGTTGCAAGTTTCTCCACTCCCTCAACTCCTCTACCTTATGACCAAATGAAGGACCAGTGCGAGGCACTTGAAGCAGGGAAACAACAGAAGATGTCCGTCATTCAGAGTTTCAAGCATCAACAAGAAAGTAACGCCATAATTCTTTCGAGTGAAAATGAAGTTACAGTTGCCCCTCTACATGCTAAGGCACTGGAATATTCAAAAAGTGATTTGCAGTTAGTAACTCAGGAAACATTTAAAGCACAGGATCAAGCACGCAACCATTATCATGACTACGGGCTGCAGCATTCTTTGAGGCTACCTCCTTCGAGCCCCTATGATAAATTCTTGAGAGCTGCGGGATGCTAA 2970 0.4212 MGVMSRRVVPVCGNLCVFCPSLRARSRQPVKRYKKLMADIFPRNQVAEPNDRKIGKLCEYASRNPMRIPKITDNLEQRCYKDLRHENFGSVKVVLCIYRKLLSTCKEQMPLYANSLLGILRTLLEQTRSEEMRILGCKTLVEFTDCQTNGTYMFNLEGFIPKLCQLAQEVGDNEQALLLRSAGLQALSYMVQFMREHSHLSMDFDQIISVILENFTDLQSKSNLAKVEKLNSQSQSQLVQQFPKGGDLHSLSDISKKNASLLNGVTGTETEPKLDTAKDPAYWSKICLYNMAKLAKEATTVRRVLEPFFHNFDAENYWSSEKGVASCILQYLQSLLAESGDNSHLLLSILVKHLDHKNVAKQHILQIDIIKTTTQLAQNVKQQASVAIIGAISDLVKHLRRCLQNLAEASSIGDATYRLNTELQSVLEMCILQLSKKVGDIGPILDLMAVALENISVTTITARSTISAVYQTAKLVTSIPNVSYHNKAFPDALFHQLLLVMVHPDYETQIGAHKIFSLVLTPSMVSPWLDHKTMTAHKAPNDCFCNPPETFSGDENWNGKLEEEKTISGVKGKKYAIHPYRGYSFSPKLTDGNEDQSSLRLSSHQVSLLLSSIWVQATSVGNGPSNYEAMAHAYSIALLFTCSKVSSHMGLARAFQLALSLRRVSLDQQGGLQPSRRRSLFTLASYMLIFSARAGNLRDLIPIVKASLTKETVDPFLELVDDIRLLAVCKEMEKITYGSEEDEAAAVKSLSAVELDDKQLKETVISYFMTKFSKLSEDELSSIKNQLVQGFSPDDTYPLGPLSFMETSRPCSPLPLIELPSFDEMMIPDDLTEIETGPEHSGSQSDRKTSQSTNHPDVLSVNQLLDSVLETARQVASFSTPSTPLPYDQMKDQCEALEAGKQQKMSVIQSFKHQQESNAIILSSENEVTVAPLHAKALEYSKSDLQLVTQETFKAQDQARNHYHDYGLQHSLRLPPSSPYDKFLRAAGC 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00304 989 SUPERFAMILY ARM repeat 70 518 IPR016024 -
Vian11g00304 989 PANTHER PUTATIVE, EXPRESSED-RELATED 1 989 - -
Vian11g00304 989 MobiDBLite consensus disorder prediction 833 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00304 Vian-Chr11 2829093 2842733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00304 K21842 - gmx:100806860 1568.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00304 11 2829093 2842733 Vian11g00304 11 2829093 2842733 ECH
Vian11g00304 11 2829093 2842733 Vian5g01409 5 36741176 36747714 PCT