Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01333 ATGGCTCAACTCGAACGCCCCCAGAGACAACTTGAAACTACTGCAAAAGCTCCCCCTGCCATCCACACCATGGAACAACTCCTCCGAGGTAATCGTTTCCTCACAAAAAATTATGACTTCTCATACCATAATGTTTTACCATGCACGTCTACTCAAGGGGAGTCCTCAAAGTCTAGTAAGAATTCACCAACCTGCTCCTCTTCCCCTTCCTCCAACTTGTCTTCCCCCGGCTCCCCTTTCTTCCAAAGGTTGAGGTCTTCTCATGACTCAGAAGATGATCATTCCCAGAATCCCAAAAAATCAGTTCTCACCAAAGTCAAGGAGAAGGCCAAGAAACTGCGCCACAGCCTCAGCAAGAAAAAACATGAAGATGGCAACCTCAGTAGTCCATCATCTGCTACTGCCGCAGAAGGTGATGGAGCAGAAGAAGATGCTGAATTTCTCGGAGCTCCTAGTAATATACATCTGTACGAATCAGAGAAGACACCTACTGGGTACAAAGCAAATGTAAAGCAGATTCCAAGTCCAAGAGCAAATCCTATGATCCCTGAGAAGCATGTTGTATCAAGCAGTGACAAACACGTAGTCGAACAAGATCATGAAAGGTCACTGTACCGTTCCTTATCCAAGAGAACAACACACCCTGCAACAACAATAACAGCCACCACCCCAAATGCTACCACTGCTTCTGTTACTAATATTAACGTTAATACTCATCCTAGTACTCCTTCTCCTCTAAACAAGACAACCACTGAAACGGCAGCACCTAAACTGTCAACAGTTCAGACTGAAAAACCAGATGCTGCACATGCAACCTCCAAAGTTCAAGGTCTCACTGTGTCCAAACCCTCAGAGCTTCATGATCATCCTTCACCATCATCACCATCATCACCATCATCATCATCACCAGCAACATTTGCACCAAAATCAAGTCGCAGCAATTTGTCCTATTCTGCTCCTCGTACTCCCCTTGCAAGAGTAGCAACTTCCCAGTTTCCTACAACCACTCCGCGAACTACATCAGCTCCAATAACTTCAGCACTATCAGCTGCTCCTTCACTGAGTGGGAAGAACACAAGCCCCACCGCGCAAATATGGGATAAGGGTGTGTCCATGAAAGAGTACTTCTTGAACAAACTGGAGCCGGGGGAAGATGAGAAGGCGTTGTCTCAGGTGATATCTGAAGCAATGAGTCCTCGCAGAACTCCTGGTGATGCAGGCGTGATGGAGAAGGTGAGAGAAGCTGTCACTTCTTTGCTCCGAACTGAGGAACCTGCAAAATACGCAGACGCATCTAATGTTGCTACTCCGAGTACTACTCGCTTGTCACCTCAGAGCCCAGTATCTATCAACGCTTCACGCTCTTCATCTCTAATGCCATCATACTCCAATGCTTCTCGTGCTTCTTCTCAAATGCCAGCATCTACCAGTGTTTCTCGCACTTCATCACAAGTCCCTATATCTTACAACGCCCAGCAAGACTATACAGAGGCCCAGGAAGAAAACCATGGCCGAATTCTTCAGGCAAATTGA 1533 0.4658 MAQLERPQRQLETTAKAPPAIHTMEQLLRGNRFLTKNYDFSYHNVLPCTSTQGESSKSSKNSPTCSSSPSSNLSSPGSPFFQRLRSSHDSEDDHSQNPKKSVLTKVKEKAKKLRHSLSKKKHEDGNLSSPSSATAAEGDGAEEDAEFLGAPSNIHLYESEKTPTGYKANVKQIPSPRANPMIPEKHVVSSSDKHVVEQDHERSLYRSLSKRTTHPATTITATTPNATTASVTNINVNTHPSTPSPLNKTTTETAAPKLSTVQTEKPDAAHATSKVQGLTVSKPSELHDHPSPSSPSSPSSSSPATFAPKSSRSNLSYSAPRTPLARVATSQFPTTTPRTTSAPITSALSAAPSLSGKNTSPTAQIWDKGVSMKEYFLNKLEPGEDEKALSQVISEAMSPRRTPGDAGVMEKVREAVTSLLRTEEPAKYADASNVATPSTTRLSPQSPVSINASRSSSLMPSYSNASRASSQMPASTSVSRTSSQVPISYNAQQDYTEAQEENHGRILQAN 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01333 510 MobiDBLite consensus disorder prediction 50 84 - -
Vian5g01333 510 Coils Coil 103 123 - -
Vian5g01333 510 MobiDBLite consensus disorder prediction 85 104 - -
Vian5g01333 510 MobiDBLite consensus disorder prediction 258 277 - -
Vian5g01333 510 MobiDBLite consensus disorder prediction 50 142 - -
Vian5g01333 510 MobiDBLite consensus disorder prediction 423 510 - -
Vian5g01333 510 MobiDBLite consensus disorder prediction 432 510 - -
Vian5g01333 510 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 62 509 IPR037491 GO:0009737
Vian5g01333 510 MobiDBLite consensus disorder prediction 282 363 - -
Vian5g01333 510 MobiDBLite consensus disorder prediction 225 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01333 Vian-Chr5 36000892 36002707 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01333 - - var:108319604 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00363 11 3394152 3396171 Vian5g01333 5 36000892 36002707 PCT