Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00363 ATGCCTGACCGTACTTACAAACATATTGATACTGCAAGGAGTCCTACCAGCATCGCTAGTGTGGAACATTTCCTCCGAAGTGCAGCCGGGGATTCTTCTAGGATGTCACCAACTAGCTCTTCCCCTTCCTCTCCTATGAAACAACAGGACCTGGAAGAAGACCAAGGCCTCTATCAGAAGAAATCAGTCCTCACCAAAGTGAAGCAAAAGGCCAGGAAATTTTGCAACAGCCTCAGCAAGAAAAGAATAGAGGACGACAATGTCACACCCTCTAGTAGAGCTAGGTTTGCGGATGAAGAGGAGGAGGAAGAAATTGAAGAAGAAGAAGAAGAAGACGACGCTGAATACCTTGGAGCTCCTATGTATGAATCGGAGCAGGCACCTGAGACATACAAAGAAAATGCAAGGCAACATCCAAGAGCAAATCCAGTAATATCTGAGAAGCACGTTTTGCACAACGCTGTCAAACTAGGAATGCAGGAAGATCAAGAAAAGCCAAGTGCTGCTGTCAATCCCAAACTCACTTCAACAACTCAACCTAATACTGCAACAACAGTGGCAGCATCTTCATCCAACGACTCTGAAACCTTAGCTCAGAAAATGATACCTGCCTATGCTGCAGGGTCGCTTTCAGCCAACAGCATCCCGTCCCAAAATTCATCTGTTTCATCATCTCGGCTGCAACATTCATTTTCCTCACCTTCACAGAGTAGGAAGAATACAAGCCAAAACGTTGCTTCAGTCAATGATTATTTGAAGAACAAGTCTGAAAAAGAGGATGATGCCAAAATTGAGTCTCCAAAGCAAGATTTGTCATCTTCATCTGCTTCAAAGAGTGGGAAGATTACTCAAAAGACTTTTTCATTCAAAGATTATTCAACGAACAGGTCTGAACAAGGGAATGATGCCACAAATATGATTCCATTGCAAAAATCATCATCCTTCTCAGTTGCTTCATTGAGAGGGAAAAACACAGGCCAAAAGAGTGCTTTGGCCAAAGATTATTCAATGAGCAAGTCAGAGCCAAGGGATGATGAAAAAACTGAATCTCAGCCTCAGGTGACATATGGAGAAAATGGTCCAAGTAATTCAGGCATGATGGACAAGGTGAGAGGAGCTGTAAATTCATTACTCGGGAATGAGGAGCCATCAGAAGAATATGGAGTCAAAATTCCTACTACACGCACTTCATCACAAACTCAACAAGTTGGTGAGGATGAGAACCGTGGGAGAATTCTACAGGCAAATTAA 1251 0.4317 MPDRTYKHIDTARSPTSIASVEHFLRSAAGDSSRMSPTSSSPSSPMKQQDLEEDQGLYQKKSVLTKVKQKARKFCNSLSKKRIEDDNVTPSSRARFADEEEEEEIEEEEEEDDAEYLGAPMYESEQAPETYKENARQHPRANPVISEKHVLHNAVKLGMQEDQEKPSAAVNPKLTSTTQPNTATTVAASSSNDSETLAQKMIPAYAAGSLSANSIPSQNSSVSSSRLQHSFSSPSQSRKNTSQNVASVNDYLKNKSEKEDDAKIESPKQDLSSSSASKSGKITQKTFSFKDYSTNRSEQGNDATNMIPLQKSSSFSVASLRGKNTGQKSALAKDYSMSKSEPRDDEKTESQPQVTYGENGPSNSGMMDKVRGAVNSLLGNEEPSEEYGVKIPTTRTSSQTQQVGEDENRGRILQAN 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00363 416 MobiDBLite consensus disorder prediction 77 98 - -
Vian11g00363 416 MobiDBLite consensus disorder prediction 252 267 - -
Vian11g00363 416 MobiDBLite consensus disorder prediction 1 20 - -
Vian11g00363 416 MobiDBLite consensus disorder prediction 155 194 - -
Vian11g00363 416 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 30 415 IPR037491 GO:0009737
Vian11g00363 416 MobiDBLite consensus disorder prediction 125 144 - -
Vian11g00363 416 MobiDBLite consensus disorder prediction 76 118 - -
Vian11g00363 416 MobiDBLite consensus disorder prediction 25 58 - -
Vian11g00363 416 MobiDBLite consensus disorder prediction 337 351 - -
Vian11g00363 416 Coils Coil 91 111 - -
Vian11g00363 416 MobiDBLite consensus disorder prediction 211 416 - -
Vian11g00363 416 MobiDBLite consensus disorder prediction 211 251 - -
Vian11g00363 416 MobiDBLite consensus disorder prediction 31 50 - -
Vian11g00363 416 MobiDBLite consensus disorder prediction 390 407 - -
Vian11g00363 416 MobiDBLite consensus disorder prediction 99 118 - -
Vian11g00363 416 MobiDBLite consensus disorder prediction 169 194 - -
Vian11g00363 416 MobiDBLite consensus disorder prediction 268 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00363 Vian-Chr11 3394152 3396171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00363 - - vra:106758277 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00363 11 3394152 3396171 Vian5g01333 5 36000892 36002707 PCT