Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01273 ATGGCGGAAACAAACCCTGCTTCTGTTTCTTCTTCCGCGGGTGATTCGAATTGGAGAGAGAACAAGTTGGTGAAAGGATCATTTGCGGTCTCCGGAATCATGCTCACCCTCGTAACCTATGGCATCTTGCAGGAAAAGATCATGAGAGTCCCTTATGGGGTGAACAAGGACTACTTCAAATATTCTCTTTTTCTTGTTTTCTGCAACCGCATCACGACGTCTGCTGTTTCGGCTGGGGCTCTAGTGGCACGGAACAAAGTTTTGGAACCTGTTGCCCCCATTTATAAGTACTGCCTTGTGTCAATATCGAACATTCTTACCACAAGTTGTCAGTATGAGGCTCTCAAATATGTTAGTTTCCCTGTTCAGACTCTTGCAAAGTGTGCTAAAATGATACCAGTTATGGTCTGGGGCACAGTCATAATGCAGAAGAAATATCGAGGAACTGACTATTTGCTGGCCTTTGTAGTAACCCTTGGCTGCTCAGTGTTCATTCTATATCCTGCAGGGACCGACATAAGTCCATACGGTAGAGGAAGGGAAAATACTGTTTGGGGAGTTTTGCTAATGCTTGGGTATCTTGGGTGTGATGGTTTTACAAGCACTTTCCAAGATAAGATGTTTAAAGGCTATAACATGGAGATACATAATCAGATATTCTATACTACTTTGTGCTCTTGTGTTCTTAGCCTGACAGGCCTTATCATACAAGGACAACTATTACCAGCAGTAGAATTTGTGTATCTCCATAAGGATTGTTTCTTTGACATTGCATTGCTTTCAACAGTTGCAACAGCTAGTCAATTTTTTATTTCCTACACAATTCGCACATTTGGTGCTCTAACATTTGCTACAATAATGACAACTAGACAGTTGGTAAGCATCATGCTATCATGTGTGTGGTTTTCCCATCCTCTTAGCTGGGAACAATGGATTGGAGCTGTAATTGTCTTTGGTGCAATTTATTCAAAAAGCTTCTTGAGGAAAGCACCCGAAAAGACAACAACCTCATCTGTAGAACATGTACAAAATGGAAATTCAAATAATTTGAAGGAGAACCCATGCTAG 1068 0.4139 MAETNPASVSSSAGDSNWRENKLVKGSFAVSGIMLTLVTYGILQEKIMRVPYGVNKDYFKYSLFLVFCNRITTSAVSAGALVARNKVLEPVAPIYKYCLVSISNILTTSCQYEALKYVSFPVQTLAKCAKMIPVMVWGTVIMQKKYRGTDYLLAFVVTLGCSVFILYPAGTDISPYGRGRENTVWGVLLMLGYLGCDGFTSTFQDKMFKGYNMEIHNQIFYTTLCSCVLSLTGLIIQGQLLPAVEFVYLHKDCFFDIALLSTVATASQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFSHPLSWEQWIGAVIVFGAIYSKSFLRKAPEKTTTSSVEHVQNGNSNNLKENPC 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01273 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 322 - -
Vian5g01273 355 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 20 329 IPR013657 GO:0055085
Vian5g01273 355 Pfam UAA transporter family 27 325 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01273 Vian-Chr5 35521935 35526631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01273 19 335 Organic Solute Cotransporters AT5G59740 81.703 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01273 K15276 - gmx:100782423 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00420 11 3920474 3927385 Vian5g01273 5 35521935 35526631 PCT