Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00420 ATGGTTACCCTCGTCACCTATGGTCTCTTGCAGGAAAAGATTATGAGAGTACCGTATGGAGCAGAAAAAGAGTATTTCAAATATTCACTGTTTCTTGTTTTCTGCAACCGCATCACAACATCTGCTGTTTCTGGTGGTTCTTTGCTGGCAAGTAAAAAGGCTATGGACCCGGTAGCTCCTGTTTTTACTTATTGCCTTATCTCGGTATCAAACATACTAACTACAACTTGCCAGTATGAGGCCCTCAAATATGTTAGTTTTCCTGTTCAGACCCTTGCAAAATGTGCAAAAATGATACCAGTTATGGTCTGGAGCACCATCATCATGCAGAAGAGATACCACGGACCTGACTATTTGTTCTCTTTTTTAATTACCCTTGGCTGCTCAGTGTTTATCCTGTATCCGGCAGGAACAGACGTAAGTCCTCAAAATAGAGGAAGGGAAAATACAGTTTGGGGTGTTCTCCTAATGGTTGGGTATCTTGGGTTTGATGGCTTTACAAGCACATTCCAAGATAAGTTGTTTAGAGGCTATGACATGGAGATACATAATCAGATATTTTACACAACATTATGTTCTTGTATTCTTAGCCTGACAGGTCTTATTTTACAAGGGCATTTAATACCAGCAGTAGAATTTGTTTATCAGCATCACGATTGTTTCTTTGACATAGCATTGCTTTCGACAGTTGCAACAATTAGTCAATTCTTTATCTCGTACATAATTCGCACTTTCGGTGCTCTGACTTTTGCAACCATAATGACCACAAGACAGTTGTTGAGCATTATGCTGTCATGTGTGTGGTTTGCCCATCCTCTTAGCTGGGAACAGTGGATTGGAGCTGTCATTGTCTTTGGATCCCTTTATGGAAAAAGCTTTACGAGGAAACCACCTCAAAAGACAACCTCATCATCAGCTGAACTTGTTCAAAATGGGGATTCAAATAATTTGAAGCACAATCCATGA 966 0.4017 MVTLVTYGLLQEKIMRVPYGAEKEYFKYSLFLVFCNRITTSAVSGGSLLASKKAMDPVAPVFTYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWSTIIMQKRYHGPDYLFSFLITLGCSVFILYPAGTDVSPQNRGRENTVWGVLLMVGYLGFDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSCILSLTGLILQGHLIPAVEFVYQHHDCFFDIALLSTVATISQFFISYIIRTFGALTFATIMTTRQLLSIMLSCVWFAHPLSWEQWIGAVIVFGSLYGKSFTRKPPQKTTSSSAELVQNGDSNNLKHNP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00420 321 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 1 295 IPR013657 GO:0055085
Vian11g00420 321 MobiDBLite consensus disorder prediction 296 321 - -
Vian11g00420 321 Pfam UAA transporter family 1 291 IPR013657 GO:0055085
Vian11g00420 321 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00420 Vian-Chr11 3920474 3927385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00420 1 310 Organic Solute Cotransporters AT5G59740 79.421 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00420 K15276 - gmx:100782989 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00420 11 3920474 3927385 Vian11g00420 11 3920474 3927385 ECH
Vian11g00420 11 3920474 3927385 Vian5g01273 5 35521935 35526631 PCT