Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01226 ATGCAGACACCAAAGACAAGAAGTGGATCCTCTGAGGTGCCTCAGAAGGTGTCTCCTCGTGCTGTGCGCCAACTAAGGCCTACTACTGTGGAAACTGATTCCGTATCTTCTTCAAGTCAGGCTAATAAATCATCAAAGGAGAGAAGCCCCAAAGTCACTGATCGCAGATCACCCAGAAGCCCAGTTGTTGAGAGGAAGCGCCCCAGCAAAATATCTGAATTGGAATCTCAAATTTCTCAACTCCAAAATGATTTGAAGAAGGTGATGGATCAGCTTGTTTTGTCTGAATCAAGCAAGAGGCAAGCGCAGCAAGATGCCCTGGAGTCCAAGGAGCAACTATTAGCTCTATCTGCAAAATTTGAAGACTCACAAAAACACGTTTTGGATCTTTGTGCTGCTGGGGAAGGTCGTGTTCTTGAGCTGCAGAAAATCATAGATGAGCGTGATATGGCATGCCAATCTGAACTTGAGGCCTCCAAAAAGCAGCTCTCAGTTGAGTCTGCTGCCTTGGCCTCTGCAATGAATGAAATTCAGATGCTGAAGACCGAACTTGAATTGGTAGCCAATTGTGAGAGTGTACAATCTCAACAGGCAAAATCAGCAGACATGGAGCTACTAAACCTGAAGCAGAACTTGTCTGAAGCTCTTTCTCTTGTGGACACCATGAAAAACCAACTAAGGGATTACAAAGAATCTGAAGCTCAGGCCCAAGCATTGGTCAATGAAACCATGTTGCAACATGAGGCTGCAAAAAAATCTATTGAGATCCTAAGAGCAGATGTTGCAAAAGCTGTTGATGCCTACAACACTATTGCTTTGGAGTTGGACCAGTCCAAAGCACGGGTAAGCTCACTAGAGGCCCTTGTTAGCAAGCTTCAGACAGATCCCATCAGTAGCAAATTTGAACACCAACCTGAAATATGGATAGAGGGAGAGGGTTCTGATGATCTAGAAGCAGAAGTTGTTTCTTTGAAGTCTGAGGTTGGACGCCTGCAATATGCTGTAGAGACTGCTGAGACTAAATACCAAGAAGAAAAGATTCAAAGCACAGTGCAGATCAGGAGTGCATATGAGCTGGTGGAGCAGATAAAATCTGAAACTGGTAAGAGGGAAGGTGAGCTAGAGGCCGAGTTGAAAAGGAAGAAAGCTGACATTGAAGAGTTGAAGGCTAACCTAATGGATAAGGAAACTGAATTACAAGGCATTGTGGAGGAGAATGACAACTTGAACACCAAGCTCCAAGAGAGCATGTCATCTAAAAATGAGCATGAACTCAAAAGGGAAACTAAAAGACTAGAAGAATGTGTGGCTGAACTGAAGTCAGACATGATGGACAAGGAGACAACACTGCAAAGCATATCTGAGGAGAATGAAATGCTGAAGATGGAAATCAACAAGCTCTCAGATGGTGGCAAAGTGAGTGAGGAAGTTGCAGCTGAGGTAGAGGGAGCTAAGGCTGCAGAACGAGAAGCTCTGATGAAACTTGGGATTGTGATGGAGGAAGCAGATAGGAGCAACAAGAAGGCTGCAAGAGTGGCTGAGCAGCTAGAAGCAGCACAAGCAGCAAATCTAGAAATGGAAGCAGAACTGAGAAGACTAAAGGTGCAGTCTGATCAGTGGAGGAAGGCTGCAGAGGCAGCTGCTGCTATGCTTTCATCAGGAAACAATGGGAAACTCACAGAGAGAACTGTGTCTCTGGATAACAACTACAAGTGCTCACCCTATGCTGAAGACATGGATGATGATTTCCAGAGAAAGAAAAATGGCAACATGCTGAAGAAGTTTGGGGTCTTGTGGAAGAAGCCTCAAAAATAG 1815 0.4474 MQTPKTRSGSSEVPQKVSPRAVRQLRPTTVETDSVSSSSQANKSSKERSPKVTDRRSPRSPVVERKRPSKISELESQISQLQNDLKKVMDQLVLSESSKRQAQQDALESKEQLLALSAKFEDSQKHVLDLCAAGEGRVLELQKIIDERDMACQSELEASKKQLSVESAALASAMNEIQMLKTELELVANCESVQSQQAKSADMELLNLKQNLSEALSLVDTMKNQLRDYKESEAQAQALVNETMLQHEAAKKSIEILRADVAKAVDAYNTIALELDQSKARVSSLEALVSKLQTDPISSKFEHQPEIWIEGEGSDDLEAEVVSLKSEVGRLQYAVETAETKYQEEKIQSTVQIRSAYELVEQIKSETGKREGELEAELKRKKADIEELKANLMDKETELQGIVEENDNLNTKLQESMSSKNEHELKRETKRLEECVAELKSDMMDKETTLQSISEENEMLKMEINKLSDGGKVSEEVAAEVEGAKAAEREALMKLGIVMEEADRSNKKAARVAEQLEAAQAANLEMEAELRRLKVQSDQWRKAAEAAAAMLSSGNNGKLTERTVSLDNNYKCSPYAEDMDDDFQRKKNGNMLKKFGVLWKKPQK 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01226 604 Coils Coil 71 91 - -
Vian5g01226 604 Coils Coil 99 119 - -
Vian5g01226 604 MobiDBLite consensus disorder prediction 1 74 - -
Vian5g01226 604 Coils Coil 371 412 - -
Vian5g01226 604 MobiDBLite consensus disorder prediction 25 46 - -
Vian5g01226 604 Coils Coil 422 470 - -
Vian5g01226 604 MobiDBLite consensus disorder prediction 1 17 - -
Vian5g01226 604 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 604 IPR029688 -
Vian5g01226 604 MobiDBLite consensus disorder prediction 47 72 - -
Vian5g01226 604 Coils Coil 275 295 - -
Vian5g01226 604 Coils Coil 499 543 - -
Vian5g01226 604 Coils Coil 205 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01226 Vian-Chr5 34841264 34844899 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01226 - - gmx:100798862 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00452 11 4301983 4304587 Vian5g01226 5 34841264 34844899 PCT