Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00452 ATGGCAAATTGTTTATTGCTGGTCTTTATTGCTAGAGTTCAGAGATGCGCAAGTAACTCCTCTGAAGTGCCTCAGAAAGTGTCCCCTCGTGGTGGTGGACGCCAACTCAGGCCTGCCACACTAGATACTGCATCTTCATCAAACCAAGCTCACAAAACTTCAAAGGATCATAGAAGTCCTAAAGTGACTGAGCGCAGATCACCCAGAAGTCCAGCTCCAGAGAGGAAGCGTCCTAGCAGAATATCTGAATTAGAATCTCAGATTTCTCAACTCAAAGAGGAATTGAAGGTTGTGAGGAACCAGCTCAGTTTGTCTGACTCATCCAAGAAGCAAGCTCAGCAAGATGCAGAAGAGTCCAAGAAACAACTATTTGACGTATCTGTGGAACTTGAAGAATCTCAACAGCAACTTCTGAAGTTCTCTGCTACTGAACAAGCTCGTGTTATTGAGCTCCAGAAAACTATAGAAGAGCATGATAAGGCGTGGCAATCGGAACTCAAGGCTGCCCAACAGAAGCTCTCAGACAACACTTCTGCACTGACCTCTGCTATCGATGAAATTCAGCAGCTCAAGGTTCAACTTGAATTGGTAGCTAATTGTGAGAATGCACACACCCAAATTGCAGAATCATCGGACGTGGAATTACTGAACTTGAAGGATAACTTGGCAGAATCACTTTCCCTTGTGGAGAACATGAAAAATCAACTCCGGGATTCTAAAGAGTCAGGTCAGGCACAAGCTTTGGTCAACGAGACTTTGCGACAACTTGAAGCTGCAAAAAGAACTGTTGAGTTCCTGAGAGCTGATGCTGCAAAAGCTGTGCATGGCTACAACTCTGCTGCTTCGGAATTAGACCAATCTAGAACACGGGTGGACACACTAGAGACACTAGTCAGTAAACTTGAGTTTGGCCTCATTAGTAACAAAGGCAACCATTCTTTAAATGTTGCAGATGATGGGAACATGGAGCTGAAAGCTGAGATATCACAAAAGGGTGAGGATCTTAATCACACTGAAGCAGAAATTTATTCTTTGAGGTCTTCCATAGAGACTGATGACGAGACTAAGCACCTGGAAGAACATATTCAGTGTTCAGTGAAGCTCAGGAAAGCCTATGAGTTGATTGAGCAGATAAAATCAGAATCAAGCCAGAGAGAATCCGAGCAAGAGGTAGAATTGAAAAGAAAGAATGCTGATATTGAACATTTGAAGGCTAACCTATTGGATAAGGAAACTGAGTTGCAGGGCATTGTGGAGGAGAATGAGAAGTTGAATTTGCAGCTTCAAAAGAGAAATTCATCCCAAAGAGAGCTTGAACTTAAAAAGGAGCTTCGAAAACTAGATGAATGTGTGGCTGAGTTAAAGGGTGATCTAATGGACAAGGAAACAACATTGCAAAACATATCAGAAGAGAATGAAATGCTGAAGTTGGAGCTTCGTAAGAGGTTTGGACACGGTGGTAAAGTGGGGGTGGAAGTTGCAGCAGAACTTGAGGCTGCTAAGGCTGCCGAACGTGAGGCTGTTATGAAACTTGGTATTTTGATGGAAGATGCAGAAAGGAGCAACCGAAAGGCGGAGAGGGTGGCTGAGCAGCTAGAAGCGTCTCAGGCAGCAAATTCAATAGTAGAAGCTGAACTGAGAAGATTGAAGGTGCAGTCTGATCAATGGAGGAAGGCTGCAGAAGCAGCTGCTGCTATGCTCTCAGCAGGGAACAATGGGAAGCTGACTGAGAGATCAATGTCTTTAGACAACAACTATAACTCTATGATGAATAAGTACTCACCTTTCTGTGAAGAACTTGATGATGATTTTCAGACCAAGAAAAATGGCAACATGCTGAAGAAGATTGGGATCTTGTGGAGGAAACCTCAAAAATAG 1878 0.435 MANCLLLVFIARVQRCASNSSEVPQKVSPRGGGRQLRPATLDTASSSNQAHKTSKDHRSPKVTERRSPRSPAPERKRPSRISELESQISQLKEELKVVRNQLSLSDSSKKQAQQDAEESKKQLFDVSVELEESQQQLLKFSATEQARVIELQKTIEEHDKAWQSELKAAQQKLSDNTSALTSAIDEIQQLKVQLELVANCENAHTQIAESSDVELLNLKDNLAESLSLVENMKNQLRDSKESGQAQALVNETLRQLEAAKRTVEFLRADAAKAVHGYNSAASELDQSRTRVDTLETLVSKLEFGLISNKGNHSLNVADDGNMELKAEISQKGEDLNHTEAEIYSLRSSIETDDETKHLEEHIQCSVKLRKAYELIEQIKSESSQRESEQEVELKRKNADIEHLKANLLDKETELQGIVEENEKLNLQLQKRNSSQRELELKKELRKLDECVAELKGDLMDKETTLQNISEENEMLKLELRKRFGHGGKVGVEVAAELEAAKAAEREAVMKLGILMEDAERSNRKAERVAEQLEASQAANSIVEAELRRLKVQSDQWRKAAEAAAAMLSAGNNGKLTERSMSLDNNYNSMMNKYSPFCEELDDDFQTKKNGNMLKKIGILWRKPQK 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00452 625 Coils Coil 515 552 - -
Vian11g00452 625 Coils Coil 81 101 - -
Vian11g00452 625 MobiDBLite consensus disorder prediction 18 83 - -
Vian11g00452 625 MobiDBLite consensus disorder prediction 51 83 - -
Vian11g00452 625 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 17 625 IPR029688 -
Vian11g00452 625 Coils Coil 249 269 - -
Vian11g00452 625 Coils Coil 386 427 - -
Vian11g00452 625 Coils Coil 116 136 - -
Vian11g00452 625 Coils Coil 321 341 - -
Vian11g00452 625 Coils Coil 451 478 - -
Vian11g00452 625 Coils Coil 215 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00452 Vian-Chr11 4301983 4304587 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00452 - - gmx:100798050 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00452 11 4301983 4304587 Vian11g00452 11 4301983 4304587 ECH
Vian11g00452 11 4301983 4304587 Vian5g01226 5 34841264 34844899 PCT