Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01225 ATGAGAACAAGCAACCACCTGATCGGTGTGCTAAACTTCCTAACGTTTCTGTTGTCGGTTCCGATCCTAGGTGGTGGGATATGGCTGAGCAGCAGAGCGAACAACACGGACTGTCTGAAGTTCCTGCAGTGGCCGTTGATCATAATCGGAGTGAGCATCATGGTGGTGTCGCTGGCGGGTTTCGCCGGCGCGTGTTACCGGAACACGTTTCTGATGCGGCTGTACCTGGTGGTGATGTTCGTGGTGATTGCGGTGCTGATCGGCTTCATCATATTCGCGTACGTGGTGACGGACAAAGGGTCGGGTCGGAGGGTGATGAACCGGGCGTATTTGGAGTACAACTTGGAGGACTATTCAGGGTGGTTGGAGGAGCGCGTGGCGAGTGATAGCTACTGGGGGAAGATAGGTTCGTGCATTAGGGATTCCAGAGTGTGTGCGAAGATGGGGAGAACCATTAATGGAGTTCCTGAAACTGCTGAAATGTTCTACGTTAGACACCTCACACCTATTCAGTCTGGTTGCTGCAAGCCCCCCGCAGAATGTGGTTATGTGTATCAGAATGAGACTGTGTGGAACCTAGGATCAGGATTGATGGGAGCCAATGCAGATTGCACAAGGTGGAGCAATGATCAAGAACAACTTTGCTATGCCTGTAATTCCTGCAAGGCTGGTGTGCTGGCAAGTCTGAAGAAGAGTTGGAGGAAGGTCTCAGTGATCAACATTGTTGTTATGATCCTCCTTGTCATTGTTTACATAGTTGCTTATGCAGCATATAGGAACAACAAGAGGATGGATAATGATGAACCCTATGGTGAAGCCAGGATGACAAAGTCACAACCTAGTGCCTTTCATCTTTAG 858 0.4977 MRTSNHLIGVLNFLTFLLSVPILGGGIWLSSRANNTDCLKFLQWPLIIIGVSIMVVSLAGFAGACYRNTFLMRLYLVVMFVVIAVLIGFIIFAYVVTDKGSGRRVMNRAYLEYNLEDYSGWLEERVASDSYWGKIGSCIRDSRVCAKMGRTINGVPETAEMFYVRHLTPIQSGCCKPPAECGYVYQNETVWNLGSGLMGANADCTRWSNDQEQLCYACNSCKAGVLASLKKSWRKVSVINIVVMILLVIVYIVAYAAYRNNKRMDNDEPYGEARMTKSQPSAFHL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01225 285 PRINTS Transmembrane four family signature 39 65 - -
Vian5g01225 285 PRINTS Transmembrane four family signature 66 94 - -
Vian5g01225 285 PRINTS Transmembrane four family signature 6 29 - -
Vian5g01225 285 PANTHER TETRASPANIN-8-RELATED 1 264 IPR044991 GO:0009734|GO:0016020
Vian5g01225 285 Pfam Tetraspanin family 6 253 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01225 Vian-Chr5 34812199 34816354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01225 1 277 Miscellaneous Gene Families AT5G60220 72.202 5.25e-132 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01225 - - gmx:100798336 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00453 11 4321500 4325191 Vian5g01225 5 34812199 34816354 PCT