Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00453 ATGAGAAGAAGCAACAACTTGATAGGTTTACTAAACTTCATCACTCTGGTGTTGTCAGTTCCAGTTCTGGGAGGTGGGATATGGCTGGGCACCAGATCCAACGGCACAGAATGCCTGAAGTTCCTTCTGTTGCCGTTGATCATCATAGCAGTGAGCATCATGGTGACTTCCTTGGCCGGTTTAGCCGGTGCCTGTTACCGCAACCTGTTTCTGATGAGCCTATACCTCGTGGCAATGATCCTCATAATGTTGGTGTTCCTCGGATTCATCATCTTTGCTTATGCTGTAACGGACAAGGGTTCGGGGAGGGAGACAGAGAACCGCGCTTACTTGGAGTATTACCTGGAGGATTACGAGGGTTGGTTGAAGGAACGCGTGGAAAGTGATGAATACTGGACAAAAATTAGCTCTTGTGTTGAGGAATCTAAGCTTTGTCGGAAACTTGGGAGAACCGTTAATGGAGTGCCTGAAACTGCTGAAACCTTCTACTTAAGAAATCTTTCTCCTATTCAGAGTGTGGTTACAGATATGAGAACCAGACAGTGTGGAGCTCAGAAGGAGTTGTGGGAAGCAACAACACAGATTGCAGAAAGTGGAGCAATGAGCAAAGCTTGCTTTGCTACGACTGTGACTCATGCAAAGCTGGTTCTCGGCAATGTGGAAGGGGGTGAAGCCCGGTTTGGCTAG 687 0.476 MRRSNNLIGLLNFITLVLSVPVLGGGIWLGTRSNGTECLKFLLLPLIIIAVSIMVTSLAGLAGACYRNLFLMSLYLVAMILIMLVFLGFIIFAYAVTDKGSGRETENRAYLEYYLEDYEGWLKERVESDEYWTKISSCVEESKLCRKLGRTVNGVPETAETFYLRNLSPIQSVVTDMRTRQCGAQKELWEATTQIAESGAMSKACFATTVTHAKLVLGNVEGGEARFG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00453 228 PRINTS Transmembrane four family signature 39 65 - -
Vian11g00453 228 PRINTS Transmembrane four family signature 6 29 - -
Vian11g00453 228 PRINTS Transmembrane four family signature 66 94 - -
Vian11g00453 228 PANTHER TETRASPANIN-8-RELATED 1 186 IPR044991 GO:0009734|GO:0016020
Vian11g00453 228 Pfam Tetraspanin family 6 138 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00453 Vian-Chr11 4321500 4325191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00453 1 172 Miscellaneous Gene Families AT5G60220 62.791 1.60e-73 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00453 - - gmx:100820399 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00453 11 4321500 4325191 Vian11g00453 11 4321500 4325191 ECH
Vian11g00453 11 4321500 4325191 Vian5g01225 5 34812199 34816354 PCT