Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01172 ATGGATTCCGAATTCGCCTTCGAATTCGACGAGTCCGAGATTTACAACTCGGGCCGGGCTAACTCGTTCGAGTTCAGCAGATCGCTTCACGGCCGCGGCTCCGCCAAGAAAAACCCCACTTCCTCCACCACCGCCGCCGCGGCGTCAGTGCCCATCAACATCCCCGACTGGTCCAAGATCCTCGGCAACGAGTACGCGAAAAGAAACAACAACAACCACGACGACGACGAGGACAACGAGTACGACGACGATCACAACGAGGGTTATGATGAATTTGAACGGAGCGGGAGAGTGCCACCGCACGAGTTTCTGGCGAGAACTAGGGTTGCTTCTTTCTCCGTGCATGAAGGTTTAGGGAGAACCCTGAAGGGAAGGGATCTGAGTACGCTCCGAAACGCCATTTGGGCCAAAACCGGTTTCCAAGACTGA 429 0.5548 MDSEFAFEFDESEIYNSGRANSFEFSRSLHGRGSAKKNPTSSTTAAAASVPINIPDWSKILGNEYAKRNNNNHDDDEDNEYDDDHNEGYDEFERSGRVPPHEFLARTRVASFSVHEGLGRTLKGRDLSTLRNAIWAKTGFQD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01172 142 Pfam Senescence regulator 34 142 IPR007608 -
Vian5g01172 142 MobiDBLite consensus disorder prediction 65 97 - -
Vian5g01172 142 PANTHER EMB|CAB72159.1 4 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01172 Vian-Chr5 34216330 34216758 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01172 - - gmx:100782946 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00478 11 4620032 4620493 Vian5g01172 5 34216330 34216758 PCT