Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00478 ATGGCCGCCAACGTTCGCAGAGCTACTTATCGTTTCCTCCCTGCCGTAGACAGAGATTCACTCTCCGATTCCACCTTTGAATTCGATGAATCTGATCTCTACACCTCTGCAAACGCTAACTCTTCGGAATTCTGCAAATCTGTACGCTCCTCCAGATTCCACAGTAACTCCTCTGCTACCGTCGGCCGTGTCGGTGCTTCGGGATCGCTTCCGGTGAACGTGCCGGACTGGTCGAAGATCCTCGGCAACGAGTACGGACAGAACCGGAGGAGGAACTATGACTATGAAGAAACTCAAAGCGATGAGGAGGAAGGAGGAGGGAGAGTGCCTCCGCACGAGTTTCTGGCGAAAACGAGAATCGCTTCCTTGTCAGTGCACGAAGGAGTTGGGAGAACGCTCAAAGGACGCGATCTTAGTAGGGTTCGAAACGCGATTTGGGCGAAAACGGGATTCCAAGATTAG 462 0.526 MAANVRRATYRFLPAVDRDSLSDSTFEFDESDLYTSANANSSEFCKSVRSSRFHSNSSATVGRVGASGSLPVNVPDWSKILGNEYGQNRRRNYDYEETQSDEEEGGGRVPPHEFLAKTRIASLSVHEGVGRTLKGRDLSRVRNAIWAKTGFQD 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00478 153 PANTHER EMB|CAB72159.1 9 153 - -
Vian11g00478 153 MobiDBLite consensus disorder prediction 89 110 - -
Vian11g00478 153 Pfam Senescence regulator 39 153 IPR007608 -
Vian11g00478 153 MobiDBLite consensus disorder prediction 88 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00478 Vian-Chr11 4620032 4620493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00478 - - gmx:100814909 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00478 11 4620032 4620493 Vian11g00478 11 4620032 4620493 ECH
Vian11g00478 11 4620032 4620493 Vian5g01172 5 34216330 34216758 PCT