Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01167 ATGTTCTGGAAGCTCGCCTCTATCTCCTCCTCTCCTGTGGAGGTAATATTGGACAAGGAGAACTTCACTTTGGAAGAACTTCTGGATGAGGAGGAAATAATCCAAGAATGCAAGGCCTTAAACAGTCGACTCATCAACTTTCTGAGAGATAGAACTCAGGTGGAGCAAATGCTACGCTACATCATTGAAGAACCACCGGAGGATGCCGAAAACAAACGGGTCTTCAAGTTCCCATTCATTGCCTGTGAGATCTTTACGTGTGAAATTGATGTAATTTTGAAGACCTTGGTGGATGAAGAAGAGCTCATGAACTTATTATTTTCCTTCTTGGCACCTGATCGTTGTCATAGTACCTTGCTGGCTGGTTACTTTAGCAAGGTCGTTATTTGTCTAATGATACGAAAGACAGTACCGCTTATGAATTATGTTCAAGCCCATCAGCATGTTTTCCGCCAACTTGTAGATTTGATAGGCATTACATCTATTATGGAGGTTTTGGTTCGATTAGTAGGTGCTGATGACCATGTATATCCCAATTTTATAGATGTGATGAAATGGTTGGCTGAGAGCAATCTACTTGAGATGATTGTTGATAAATTAAGTCCAGCTAGTCCTCCCGAAGTTCATGTCAATGTTGCTGAAACTTTGTGTACCATAACTCGAGTTGCATCATCTTCTACTCTAGCAATGAAGCTTTCAAGTCCAAGTTTTGTTGCAAAAATTTTGGGTTATGCATTGGAGGATTCACATTCGAAGTCTAGCCTTGTCAACTCACTTTCAGTGTGTATTTCTTTGTTGGATCCCAAAAGATCAGCTATTCCATCTCCGTTTTTTCATTCATTCCGAAGTCAAAACATGTATGAACCACCAATTCCTGTAAACCCAGATACCATTGGTGCAATGCTACCTAAACTTGGTGAACTGCTTGTGCTTTTGGACGTGTCATCCGACAATAAAGTATTACCTACAACGTATGGTGAATTGAGACCTCCACTTGGCAAGCATCGATTAAAGATTGTGGAGTTTATTGCTGTACTTTTGAAAACTGGAAATGAAGTGGCAGAAAAAGAATTGGCAAACTCAGGAACCATTCGACGAGTCATTGATCTTTTCTTTGAGTATCCATACAATAACTCATTACACCATCACATAGAAAGCATCATATCATCATGTCTGGAGAGCAAATCTAATGCCATCATTGATCATGTGCTCCGAGATTGTGATTTAGTTGGAAGGTTTATCCAAGCAGATAAAAATTCTATTCTTTCTGCTGAAAGCAATCAGCCCACGGTACCTGCTACAGGAAAACGGGGAACACGAATAGGAAACATTGGACATATTACTCGAATTTTCAACAAACTTGTTCACTTGGCCCATAACCAAAGCCACATTGTGAAATGTCTCCAGGAGAATAGTGAGTGGAATGAGTGGCAATCTACTGTTCTTCAGCAGCGTAATGTGGTTGAGAATGTTCACCGTTGGGCTTGTGGACGCCCAACTGCATTACAAGATAGAATGAGGGATAGTGATGATGAAGACCTTCATGACAGAGACTATGATGTTGCAGCTTTAGCAAATAATTTGAGCCAGGCTTTTAGATACAAAATTTATGGAAATGAAGATAATGAAGAGGAACATGGTGTTCTTGATCGAGATGACGAGGATGTCTACTTTGACGATGATTCTGCTGAAGTAGTCATATCATCCCTAAGACTTGGTGATGATCAAGGGAGTAACCTGTTTACAAACTCCAACTGGTTTGCGTTCCAAGATGACAGAATTGGTGATGCACCTGGGGGCACATCATCCTCTGAGATGATGGATGAGATAAAATTGAACTCAGCTTCAAATGGTGGTAGCAACAGTAGTGATGACGAGGTAGTGGTTGGAGAGGATGAAGAATTGGCTGACAGCAAAAACACTGTGAATGGTATATCTAGCTCAAGCACGGACTTCTTTAGTGGATTAACTGGTAGTGATTCCATGAATGGCACCTTAGACTTTGAAAGTGAGAAAACAAGTCCTTCACATAATATGGGATTCTTCAGGTTTGAGGCACCAGACAATGAGGACTTGTTTGGCGATAGATCTTTACCTGATTGGGTGGGATGGGGTGAACCATCAGATATGCAAAATTCTGGCTCAAGTAGGAATCCCTTTCTGGATCATGACGAGTCTGGTAGTAATTTTCCTATCAAGCCTCAGGTAGACAGTCTTGTTCTGAATTCTCCTTCAAATGGGGAATCTGTACCTTCTTCGAATGGATCGCCAACGACTACTACAGATTCAATTAATGGGAGCATTGACTCCAGTCCAACAACAGTAGCGGTACCCTCGCTATTTGAAGAGGATGTGGAATTTGTAGGAGTGGAATTAGATGGTACCGAGAAGGCAATGGAACAGGCTTTAAAAGAAGGCACAGTTGGCGAAGCCGGACCATTGAAAAGAAACGCAGTGTCAAAGGTTCCAGAAAAGGAAAATTCTGAAGAAGATGGCAGTCATGCTGTGAAGGACTTCAACGATGCAAATTACTGGAGGGTCGACAAAGAGGTTGCTGTTCTAGAGTGA 2568 0.4151 MFWKLASISSSPVEVILDKENFTLEELLDEEEIIQECKALNSRLINFLRDRTQVEQMLRYIIEEPPEDAENKRVFKFPFIACEIFTCEIDVILKTLVDEEELMNLLFSFLAPDRCHSTLLAGYFSKVVICLMIRKTVPLMNYVQAHQHVFRQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVMKWLAESNLLEMIVDKLSPASPPEVHVNVAETLCTITRVASSSTLAMKLSSPSFVAKILGYALEDSHSKSSLVNSLSVCISLLDPKRSAIPSPFFHSFRSQNMYEPPIPVNPDTIGAMLPKLGELLVLLDVSSDNKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEVAEKELANSGTIRRVIDLFFEYPYNNSLHHHIESIISSCLESKSNAIIDHVLRDCDLVGRFIQADKNSILSAESNQPTVPATGKRGTRIGNIGHITRIFNKLVHLAHNQSHIVKCLQENSEWNEWQSTVLQQRNVVENVHRWACGRPTALQDRMRDSDDEDLHDRDYDVAALANNLSQAFRYKIYGNEDNEEEHGVLDRDDEDVYFDDDSAEVVISSLRLGDDQGSNLFTNSNWFAFQDDRIGDAPGGTSSSEMMDEIKLNSASNGGSNSSDDEVVVGEDEELADSKNTVNGISSSSTDFFSGLTGSDSMNGTLDFESEKTSPSHNMGFFRFEAPDNEDLFGDRSLPDWVGWGEPSDMQNSGSSRNPFLDHDESGSNFPIKPQVDSLVLNSPSNGESVPSSNGSPTTTTDSINGSIDSSPTTVAVPSLFEEDVEFVGVELDGTEKAMEQALKEGTVGEAGPLKRNAVSKVPEKENSEEDGSHAVKDFNDANYWRVDKEVAVLE 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01167 855 MobiDBLite consensus disorder prediction 819 835 - -
Vian5g01167 855 MobiDBLite consensus disorder prediction 639 656 - -
Vian5g01167 855 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 829 IPR007587 GO:0019903|GO:0043666
Vian5g01167 855 MobiDBLite consensus disorder prediction 731 775 - -
Vian5g01167 855 Pfam SIT4 phosphatase-associated protein 357 490 IPR007587 GO:0019903|GO:0043666
Vian5g01167 855 Pfam SIT4 phosphatase-associated protein 130 357 IPR007587 GO:0019903|GO:0043666
Vian5g01167 855 MobiDBLite consensus disorder prediction 807 835 - -
Vian5g01167 855 MobiDBLite consensus disorder prediction 708 723 - -
Vian5g01167 855 MobiDBLite consensus disorder prediction 703 775 - -
Vian5g01167 855 MobiDBLite consensus disorder prediction 612 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01167 Vian-Chr5 34152098 34164456 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01167 K15501 - gmx:100805409 1480.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00481 11 4683016 4691519 Vian5g01167 5 34152098 34164456 PCT