Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00481 ATGTTTTGGAAGCTTGCATCTCTCTCTGCTTCCTCCCCCGTGGAGGCAATATTAGACAAGGATAATTTCACTTTGGAAGAGCTTCTGGATGAAGAGGAAGTGATCCAAGAATGCAAGGCCTTAAACAGTCGCCTTATCAACTTTTTGAGAGATCAGACCCAGGTTGAGCAATTGTTACGGTACATTATTGAAGAAGCACCCGAAGATGCTGAAAATAAACGAGCCTTCAAGTTTCCATTCATTGCCTGCGAGATTTTTACATGTGAAATTGATGTCATTTTGAAGACCTTGGTTGATGACGAAGAGCTGATGAACTTATTATTCTCCTTTTTGGAGCCTAATCGCTCACATAGTGCCTTGTTAGCAGGCTACTTTAGTAAGGTTGTTGTTTGCCTAATGATTCGAAAGACAGTTCCACTGATGAATTATGTTCAAGTCCATCAGAATGTTTTCCGTCAACTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGTGCTGATGACCATATGTATCACAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACTTGCTTGAGATGATTATTGATAAATTGAGTCCATCTTGTCCTCCCGAAGTTCATGCCAATGCTGCTGAAACATTGTGCACAATAACTAGAAATCCCTCATCTACTCTAGCAATTAAACTTTCAAGCCCAAGTTATGTTGAAAAACTATTGGATCACGCACTGGAAGATTCACAGTCAAAGTCTAGCCTTGTGAATTCACTTTCAGTGTGTGTTTCTTTGTTGGATCCCAAAAGATCTGCTATATCATCTCCCCTTTTTCATTCCTTTCGAAGTCAACACATGTATGAGCCACCAATTCCTGTAAACCCAGACACTATTGGTGCAATGCTACCAAAACTTGGTGAATTGCTTATGCTTCTGAATGTATCATCCGATGAAAAAGTGTTGCCCACAACATATGGAGAACTGAGACCTCCACTTGGCAAGCATCGATTGAAGATTGTTGAGTTCATTGCCGTCCTTCTGAAAACCGGAAATGAAGTGGCAGAAAAAGACATGGTCAATTCAGGAACTATTCAACGAGTCATTGACCTTTTCTTCGAGTATCCATATAATAACTCATTACACCATCATGTAGAAAGTATCATATTATCATGTTTGGAGAGTAAAGCTGATGCCATTGTTGATCATCTTCTTCGGGAGTGTAACTTAATTGGAAGATTTCTCCAAGCAGATAAACATTCTATTCTATCTGCTGACAAAAATACGCCAACTGTACTTGCTGCTGGAAAACAGGCACCACGGGCAGGGAACATTGGGCATATTACTCGTATTGCTAACAAACTTGTTCACCTAGCACATAGTCGAAGCCTCATACTAACATGTCTTCAGGAAAATAGTGAGTGGAGTGAGTGGCAAACATCAGTTCTTCAGGAGCGTAACGTGGTTGAGAATGTTCACCGTTGGGCTTGTGGACGTCCGACTGCTTTGCAAGATAGGATGAGGGATAGTGATGACGATGACCTTCATGACAGGGACTATGATGTTGCAGCTTTAGCAAATAATTTGAGCCAGGCTTTTAGATACAAAATTTATGGGAATGAGGATAATGAGGAGGAACGTGGCAACGGTGATAGAGAGGATGAGGATGTCTACTTTGATGATGACTCTGCTCAGGTAGTCATATCAAACCTCAGACTCAGTGATGATCAAGGGAGTAGTCTTTTCACAAACTCCAACTGGTTTGCATTCCAAGACGACAGAATTGGTGATGCAACTGGGGGCACAACATCATCTGAGATGATGGATGAGATAAACATGAATGGTGCTGCAAATGGTGGTAACAGTAGTGATGATGAGGTAGTTGTTGGAGAGGATGAAGAATTGGCTGAAAGCACCAATAATCTCAATGGTACATCTAACTCAAGCACAAACATAAATGGGGTAACTGGTAGTGATTCCATGAATGGGGACGCCTTGAACTTCGAAAGCAAAAAGGCAAGTGCTTCACATGATATGGGTTTCTTCAGGTTTGAGTCGGACAATGAAGAATTGTTTGGGGACAGGCCTTTGCCAGAGTGGGTGGGATGGGGTGGACCTTTAGATGTGCAAGATGCTGGCTCAACCACGAATCCATTTGTGGACCATGATTCTTCTGGTTACAACCTTTCTACCAAACCTCAAATAGGTAACCTAAATCCTAGTCCTCCAAATGGGGACTCTGTTCCTTCAAACAGGTCACCAGCCCCTAAAGATTCAATTGATGGGAGTATTGACTCGAGTCAAAGATCAATAGCAGTACCATCACTCTTTGAAGAAGATGTTGAATTTGTAGGTGTAGAATTAGAAGGTACTGAGAAGGCTATGGAACAGGCTTTGAAAGAAGGGATAGTTGGAGAGGCAGGTCCATTGAAAAGAAACATGGTTTCTAAAGTGCCAGAAAAAGAAAGTTCTGATGAGGGTGGTCCTGGAATAAAGGAATTCAATGATGCAAATTACTGGAGGGTTGACCAGGAAGTTGCTGTTCTGGAGTGA 2550 0.4165 MFWKLASLSASSPVEAILDKDNFTLEELLDEEEVIQECKALNSRLINFLRDQTQVEQLLRYIIEEAPEDAENKRAFKFPFIACEIFTCEIDVILKTLVDDEELMNLLFSFLEPNRSHSALLAGYFSKVVVCLMIRKTVPLMNYVQVHQNVFRQLVDLIGITSIMEVLVRLVGADDHMYHNFIDVMQWLAESNLLEMIIDKLSPSCPPEVHANAAETLCTITRNPSSTLAIKLSSPSYVEKLLDHALEDSQSKSSLVNSLSVCVSLLDPKRSAISSPLFHSFRSQHMYEPPIPVNPDTIGAMLPKLGELLMLLNVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEVAEKDMVNSGTIQRVIDLFFEYPYNNSLHHHVESIILSCLESKADAIVDHLLRECNLIGRFLQADKHSILSADKNTPTVLAAGKQAPRAGNIGHITRIANKLVHLAHSRSLILTCLQENSEWSEWQTSVLQERNVVENVHRWACGRPTALQDRMRDSDDDDLHDRDYDVAALANNLSQAFRYKIYGNEDNEEERGNGDREDEDVYFDDDSAQVVISNLRLSDDQGSSLFTNSNWFAFQDDRIGDATGGTTSSEMMDEINMNGAANGGNSSDDEVVVGEDEELAESTNNLNGTSNSSTNINGVTGSDSMNGDALNFESKKASASHDMGFFRFESDNEELFGDRPLPEWVGWGGPLDVQDAGSTTNPFVDHDSSGYNLSTKPQIGNLNPSPPNGDSVPSNRSPAPKDSIDGSIDSSQRSIAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNMVSKVPEKESSDEGGPGIKEFNDANYWRVDQEVAVLE 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00481 849 MobiDBLite consensus disorder prediction 709 766 - -
Vian11g00481 849 Coils Coil 845 849 - -
Vian11g00481 849 MobiDBLite consensus disorder prediction 703 766 - -
Vian11g00481 849 MobiDBLite consensus disorder prediction 635 657 - -
Vian11g00481 849 MobiDBLite consensus disorder prediction 615 657 - -
Vian11g00481 849 SUPERFAMILY ARM repeat 163 413 IPR016024 -
Vian11g00481 849 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 815 IPR007587 GO:0019903|GO:0043666
Vian11g00481 849 MobiDBLite consensus disorder prediction 813 835 - -
Vian11g00481 849 MobiDBLite consensus disorder prediction 814 828 - -
Vian11g00481 849 Pfam SIT4 phosphatase-associated protein 358 490 IPR007587 GO:0019903|GO:0043666
Vian11g00481 849 Pfam SIT4 phosphatase-associated protein 131 356 IPR007587 GO:0019903|GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00481 Vian-Chr11 4683016 4691519 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00481 K15501 - gmx:100777597 1451.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00481 11 4683016 4691519 Vian11g00481 11 4683016 4691519 ECH
Vian11g00481 11 4683016 4691519 Vian5g01167 5 34152098 34164456 PCT