Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01130 ATGGCTATGGCAATGGCATCAACACCAGAACTTTCCATAGTCTGTCTCTCTGTTGTGTTGTTTTTCCTCTCGCTTTCTTCTTCTTATGCAATCTCTCATGGCCTCAACCATGACCCTGCCACCTCACCACACTTATACTCACATGCACAAAAACTCATACGAAGCCTTAACATATTCCCAGAGGAATCAATTAACATCATAGAGGATGACCATTCTGGTTTTGTCCCTGGTCAGATCGTGGAGAAGAATTTCTCGTTCCTTGGTCATTCTGGCCCTTCTGTTGAAGACCTTGGTCACCATGCAGGCTACTATTCACTTCCTCGTTCCAAAGCTGCGAGGATGTTCTACTTTTTCTTTGAATCACGAAAGAACAAGAACGATCCTGTTGTGATATGGTTGACTGGAGGACCAGGATGTGCAAGTGAATTAGCTTTGTTCTACGAAAATGGTCCTTTTCATATTACCAAGAACTTGTCTCTTACATGGAATGATTACGGCTGGGATCAGGCATCAAATATTATATTCGTGGACCAACCAACAGGGACAGGTTTTAGTTACTCTTCTGATAAGAGTGACCTTCGCCACGATGAAACCGGCGTTAGCACTGATTTATATGATTTCTTGCAGGAGTTTTTCAAGGCGCATCCTAATTTCGTTAAGAATGACTTCTACATCTTTGGTGAATCATATGCTGGACACTATGTTCCTGCACTTGCATCTCGGATTAACAGTGCAAATAAACAAAAACAAGGACTTCATATAAACCTCAAGGGTCTTGCTATCGGTAACGGGTTTACCAATCCTGCAATTCAATACGAAGCATACCCAGATTTTGCATTACAAAGCAGAATAATTACAAAGGCTCAGTACGACATCGTCAGAAAGTCAGTCCCACTCTGTGATCGAGCCATTAAAAATTGCGGTGAAAAGAGCTGCCTCCTTGCGTTAGAAATTTGTGAAAACATATTCGGTCGTATACTGTCTTTTGCCGGCAACATTAATTACTTTGACATCAGAAAGAAGTGTGAGGGGAGTATGTGCTACAACTTCACAAACGTGGAGACGTTGCTAAACATGCAGAAAGTGAAGAGTGCTTTAGGTGTGAGGGGTGACTTGAAGTATAACTTATGCAGTATAAAAGTTCATAATGCTATGGCGGAAGACACGATGAGAAACCTGGAAGTGGGGATTCCTGCTCTTCTCGAAGATGGAATCAAGTTGCTGGTGTATGCTGGGGAAAAAGATCTCGTATGCAATTGGCTTGGGAATTCAAGATGGGTTCATGCCATGAAGTGGTCAGGCCAAAATGCCTTTGGAAAATCTCCTGTTGTGAAATTCGTGGTTGATGGTGCTGTAGCAGCTTCTCTTAGAAGCCATGGACCTCTCTCTTTCCTCAAGGTACATGAGGCTGGGCACTTGGTCCCTATGGATCGACCAAAAGTTTCGCTTCAGATGTTCAAACGTTGGATGGGAGGGAAAATGAAAATCAAAGGAGATAATTAA 1503 0.4265 MAMAMASTPELSIVCLSVVLFFLSLSSSYAISHGLNHDPATSPHLYSHAQKLIRSLNIFPEESINIIEDDHSGFVPGQIVEKNFSFLGHSGPSVEDLGHHAGYYSLPRSKAARMFYFFFESRKNKNDPVVIWLTGGPGCASELALFYENGPFHITKNLSLTWNDYGWDQASNIIFVDQPTGTGFSYSSDKSDLRHDETGVSTDLYDFLQEFFKAHPNFVKNDFYIFGESYAGHYVPALASRINSANKQKQGLHINLKGLAIGNGFTNPAIQYEAYPDFALQSRIITKAQYDIVRKSVPLCDRAIKNCGEKSCLLALEICENIFGRILSFAGNINYFDIRKKCEGSMCYNFTNVETLLNMQKVKSALGVRGDLKYNLCSIKVHNAMAEDTMRNLEVGIPALLEDGIKLLVYAGEKDLVCNWLGNSRWVHAMKWSGQNAFGKSPVVKFVVDGAVAASLRSHGPLSFLKVHEAGHLVPMDRPKVSLQMFKRWMGGKMKIKGDN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01130 500 ProSitePatterns Serine carboxypeptidases, serine active site. 225 232 IPR018202 GO:0004185
Vian5g01130 500 FunFam Carboxypeptidase 86 500 - -
Vian5g01130 500 Pfam Serine carboxypeptidase 96 491 IPR001563 GO:0004185|GO:0006508
Vian5g01130 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 175 IPR001563 GO:0004185|GO:0006508
Vian5g01130 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Vian5g01130 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 211 236 IPR001563 GO:0004185|GO:0006508
Vian5g01130 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 186 IPR001563 GO:0004185|GO:0006508
Vian5g01130 500 Gene3D alpha/beta hydrolase 81 498 IPR029058 -
Vian5g01130 500 SUPERFAMILY alpha/beta-Hydrolases 97 493 IPR029058 -
Vian5g01130 500 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 93 479 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01130 Vian-Chr5 33340229 33342472 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01130 K16298 - gmx:100798795 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01130 5 33340229 33342472 Vian11g00516 11 5123616 5126983 PCT