Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01124 ATGTCTCCAGAACTCTCATTGAATCAAACAACACAGCTCCTTCGCAGTCTCTGCACTCTCGAGGTATCTGGAATCTATCTCATTTTGTCCTACAGGTCTTCGTCGCTGAAGAACTTGAAGGTGTTTGTGTACGATCTTCCGCCCAAGTACAACACGGATTGGTTATCGAACGAGAGGTGTAGTAAGCAGTTGTTTGCGTCGGAGGTTGCCATTCACAGGGCTTTGTTGACCAGCGAGGTCCGCACGTTTGACCCTTACGAAGCTGACTTTTTCTTCGTACCCGTTTATGTCTCTTGCAACTTCAGCACCGTCAATGGCTTTCCCGCGATTGGTCACGCGCGCTCCCTCATCGCGTCCGCGGTCAACCTCCTGTCCTCGGAGTACCCTTTCTGGAACCGGAGCAGGGGCTCCGACCACGTCTTCGTCGCCTCGCATGACTTCGGCTCGTGTTTCCACACGCTGGAGGACGTGGCGGTGGCTGATGGCGTCCCAGAGATTATGAGAAACTCGATCGTGTTGCAGACGTTTGGCGTTGTGTACGAGCACCCATGTCAGAAGGTTGAGCACGTGGTGATTCCGCCGTATGTTTCGCCGGAAAGTGTCCAGGACACGATGGAGAACTCTCCGGTGAACGGACGGCGAGATATTTGGGTTTTCTTCCGAGGCAAAATGGAACTTCATCCCAAGAACGTTAGTGGAAGATTTTACAGCAAGAAAGTGAGGACAATGATATGGCGAAAGTTCAACGGTGACCGGAGGTTTTACCTACAGAGACACAGGTTCGCCGGTTACCAGTCAGAGATTGCACGCTCGGTGTTTTGTCTGTGCCCTTTGGGGTGGGCCCCGTGGAGCCCGAGGCTGGTAGAGTCCGTTGCTCTGGGTTGCGTGCCGGTAGTTATAGCGGACGGTATCCGTCTGCCGTTTCTCTCAGCCGTGAAATGGTCGGAGATATCGATCACGGTGGCGGAGAGGGACGTCGGGAGGCTGGCGGAGATACTGGAGCGCGTGGCAGCGACGAACCTGAGCACGATTCAAAGGAACCTGTGGGACCCGGCGACCAGAAGGGCGCTACTTTTTAACAGCCAGGTTCGGGAAGGGGACGCCACGTGGCAGGTCCTACGTGCTTTGAGCGAAAAGCTTGACAGGTCCTACAGGGGTTCGAGGGTTTCACGCCAATTGGATTTTGACACGGGAAGATCAGCTTTACGACTTTCTTCGAGGTTATTAATGGTGACGTGGCTTATGGCGATGACATGGCAAGAATTGATTGGAGGGATTTGCGGTTTGGAGAAGAACTGTAAAATATCTCTGGGGTAG 1317 0.5361 MSPELSLNQTTQLLRSLCTLEVSGIYLILSYRSSSLKNLKVFVYDLPPKYNTDWLSNERCSKQLFASEVAIHRALLTSEVRTFDPYEADFFFVPVYVSCNFSTVNGFPAIGHARSLIASAVNLLSSEYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAVADGVPEIMRNSIVLQTFGVVYEHPCQKVEHVVIPPYVSPESVQDTMENSPVNGRRDIWVFFRGKMELHPKNVSGRFYSKKVRTMIWRKFNGDRRFYLQRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFLSAVKWSEISITVAERDVGRLAEILERVAATNLSTIQRNLWDPATRRALLFNSQVREGDATWQVLRALSEKLDRSYRGSRVSRQLDFDTGRSALRLSSRLLMVTWLMAMTWQELIGGICGLEKNCKISLG 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01124 438 Pfam Exostosin family 37 335 IPR040911 -
Vian5g01124 438 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 36 356 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01124 Vian-Chr5 33265309 33267239 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01124 K20889 - gmx:100818569 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00518 11 5147458 5149128 Vian5g01124 5 33265309 33267239 PCT