Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00518 ATGTCAGAGCAAAAGAAACCCCCCAAAAGCAGGGTTTTCTTTGTTGGGATGAAGCTTCTGCATAAACCAGGGAACAAGCCTCCACAAGAGAAAAACAGTTTCTTTCATACATATTACAAATGGCTTCTTTGGCTTTCTCTTTCCCTCTATTTCTTCACTTCCTATCTCATCACCAGCAACCCCAACACCACACCAACCTCTCCAGACACATCGTCCCATGTTTCAAACTCCGAGTCCCACGCTGTCCCCCGTGCCCTTATGGACTCCGAAACCAACTCTCTAGGGGTGTTGAAGAATCTGAAGATGTTCGTGTACGAGCTTCCTCCCAAGTACAACACCCATTGGCTCGCAAACAAGAGGTGTGGCAACCATTTATTCGCGTCGGAAGTGGCCATCCACAGGGCACTGTTAACGAGCGAGGTTCGCTCGTTTCATCCTTATGAAGCTGATTTTTTCTTCGTACCCGTTTACGTTTCTTGCAACTTCAGCGCCGTGAACGGCTTCCCCGCCATTGGGCACGCGCGCTCTCTTATTTCCTCCGCCGTCAACCTTGTGTCCATGGAATACCCTTTCTGGAACCGCAGCAAGGGACGTGACCATGTCTTTGTCGCTTCCCACGACTTTGGTGCGTGTTTCCACAGCCTGGAGGATGCGGCCATTGCTGATGGAATACCCCAAATTTTGAAGAATTCCATTGTGTTGCAGACATTCGGCGTTGTTCACAGGCATCCGTGTCAAGACGTGGAGAACGTGGTGATACCACCTTACGTTTCGCCGGAAAGTGTACGGAGCACGCTGGAGAATTTTCCGGTTAACGGCCCGCGAGAAATTTGGGCGTTTTTCCGTGGGAAAATGGAATTGCATCCTAAAAATATCAGTGGACGGTTTTACAGCAAGCGAGTGAGGACGGACATTTATCGGAAGTTCAACGGTGACAGGAGGTTTTACCTGCAAAGGCACAGGTTTAGCGGCTACCAGTTGGAAATTGCTCGGTCGGTGTTCTGTTTGTGTCCGTTAGGGTGGGCACCGTGGAGTCCGAGGTTAGTTGAATCTGTTGCGTTGGGCTGTGTGCCGGTCATTATTGCGGATGGGATTCAGTTACCGTTTTCCTCCACCGTGCGTTGGTCGAAGATATCGCTGACGGTGGCGGAGAGGGACGTGGGGAAGCTAGGGAAGATTCTTGAGCGCGTGGCAGCAACGAACCTGAGTGACATTCAGAGGAACTTGTGGGACCCGCGAACGAGGCGGGCCCTGCTTTTCAACGAGGAGATGGAGTACGGCGACGCCACGTGGCAAGTTCTGGTTAGTTTGAGTGAGAAGCTCCATAGGTCTTACCGAACGTTTTCGGGTAGTGACGAATTACAGAGCGACACGTGA 1377 0.5127 MSEQKKPPKSRVFFVGMKLLHKPGNKPPQEKNSFFHTYYKWLLWLSLSLYFFTSYLITSNPNTTPTSPDTSSHVSNSESHAVPRALMDSETNSLGVLKNLKMFVYELPPKYNTHWLANKRCGNHLFASEVAIHRALLTSEVRSFHPYEADFFFVPVYVSCNFSAVNGFPAIGHARSLISSAVNLVSMEYPFWNRSKGRDHVFVASHDFGACFHSLEDAAIADGIPQILKNSIVLQTFGVVHRHPCQDVENVVIPPYVSPESVRSTLENFPVNGPREIWAFFRGKMELHPKNISGRFYSKRVRTDIYRKFNGDRRFYLQRHRFSGYQLEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIQLPFSSTVRWSKISLTVAERDVGKLGKILERVAATNLSDIQRNLWDPRTRRALLFNEEMEYGDATWQVLVSLSEKLHRSYRTFSGSDELQSDT 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00518 458 Pfam Exostosin family 98 396 IPR040911 -
Vian11g00518 458 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 80 417 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00518 Vian-Chr11 5147458 5149128 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00518 K20889 - gmx:100807050 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00518 11 5147458 5149128 Vian11g00518 11 5147458 5149128 ECH
Vian11g00518 11 5147458 5149128 Vian5g01124 5 33265309 33267239 PCT