Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01075 ATGAGAGACTTTGTTACTTGCTTCAGCGAGAACGCTGTAGGCGTGTCTCATTCTTCAATCTCGTGTTCTTCTTATTCGAACAACGCATGCATCTCTCCCTCCAACGTTGCACCCTCCACCCAGAACTCTGTTTCCAGCGTCTACAAGCTTGTTCTCTCCACGTTAAAGCAAATTCTGGTCACAGTCTCATGGTGTAGGAGCCACTCCAACCAAGGACTCGCCATAACCTTCAACCACGAGGACCCTCCACCCTTTAGACTCAACACCACCAATTCACGTTTTCTCAGGAAGAAAAAGGGCACCAAAATCCTCGAACCCTTTTCTTCTGACTCGTCCAAGGTCGAAATTTTGTGGGATCTTTCAAACGCCAGGTACGAATCCGGCCCCGAACCCGTTCAAGGCTTTCACCTTGTGATCATCATTGACTCGGAAATTGGCCTGGTTCTCGGTGACACCGCTGAAGAAACAGTTCTTTTCAAGAAGCTCAATTACAGAAGCAACAACATAAACACGGGTTTGGCTAAGGTTTCTCTTTTGTCACGAACAGAGCATTGTTCTGGGAGCACCCTTTACTCGACCAAGGCTCAGTTCTGCGACACCGGCACGTGCCACGATGTTATGATCAGATGCAGTATGGAGAAGGAGAATGAAGGGTTGTTCAAGTCACCGGTTTTGTGCGTGTGCATAGATAAGAAGACCGTGATTCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGGAATCAAACGATTTTCGTTGATGGGTTGCTGGTTGATTTGCTTTGGGATGTTCATGACTGGTTCTTCACCCCTTCTTCTTCTTCATCTTCTTCTGGGTATGCAGTGTTCATGTTCAGGACTAGGAGTGGCATGGATAGCAGGTTGTGGTTGGAGGAAAAGAATGCACAGAAAGATAAAGACAGGGTTGAATTCTCCTTGTTGATCTATGCATCTAAGACTACATAA 963 0.4683 MRDFVTCFSENAVGVSHSSISCSSYSNNACISPSNVAPSTQNSVSSVYKLVLSTLKQILVTVSWCRSHSNQGLAITFNHEDPPPFRLNTTNSRFLRKKKGTKILEPFSSDSSKVEILWDLSNARYESGPEPVQGFHLVIIIDSEIGLVLGDTAEETVLFKKLNYRSNNINTGLAKVSLLSRTEHCSGSTLYSTKAQFCDTGTCHDVMIRCSMEKENEGLFKSPVLCVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHDWFFTPSSSSSSSGYAVFMFRTRSGMDSRLWLEEKNAQKDKDRVEFSLLIYASKTT 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01075 320 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Vian5g01075 320 Pfam Plant protein of unknown function (DUF868) 39 318 IPR008586 -
Vian5g01075 320 PANTHER EXPRESSED PROTEIN 4 318 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01075 Vian-Chr5 32533923 32534885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01075 1 319 EF-hand Containing Proteins AT5G28150 32.710 1.23e-49 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01075 - - gmx:100794621 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00559 11 5624570 5625472 Vian5g01075 5 32533923 32534885 PCT