Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00559 ATGAATATGGCAGATATAATATCTTGCTTCAATGAGAACGCAGTGAATGTGTCACACTCATCGTGTTCTAGCTACTCAAACAACGCCTGCATATCTCCCAGTGTTACACCTTCAACGCAGAACTCGGTGACCTCTGTCTACAAAACCACCCTCTCCAACCAAAAGCAGGTTCTGATCACGGTCACGTGGTGCAAGAGCCACTCCAACCAAGGACTCACCATAACCTTCGGCGAAGAGAACCCTTTGGAACCATCTTTCAGGCTCAACACAAATTCGCGGTTGTTAAGGAAAAAGAAGGGAAGCAAGGTCCTAGAATCCCAAGACTCCAAGGTTGAAGTCTTCTGGGACCTGTCGAAGGCCAAGTACGACACTGGTCCCGAACCTGTTGAAGGGTTTTACGTGGCGATTCTGGTTGATGCAGAGATAGGACTCGTTCTTGGAGAAGAAGATGTGGTGAAGAAGTTCAAAACGAGAACCCTTTTGGCCAAGGTTTCGCTTTTGTCACGGCGTGAACATTGCTCCGGCAACGCCGTTTACGCCACCAAGGCTCAGTTCTGTGACAGCGGAACCTGGCATGACATTTTGATCCGATGCAGTGGGGAGAATGAGGGCCTGAAAGCTCCTGTTTTGTCCGTTTGCATTGACAAGAAAACGGTGATCCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGCAACCAAACGATTTTTGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAACCCTGCTTCTGGTTATGCAGTGTTCATGTTCAGGACCAGAAGTGGCTTGGATAGCAGATTGTGGTTAGAGGAAAAGATTGCACAGAAAGACAAAGACAGAGTTGAATTCTCCTTGTTGATCTATGCATGTAAGACCACATGA 903 0.474 MNMADIISCFNENAVNVSHSSCSSYSNNACISPSVTPSTQNSVTSVYKTTLSNQKQVLITVTWCKSHSNQGLTITFGEENPLEPSFRLNTNSRLLRKKKGSKVLESQDSKVEVFWDLSKAKYDTGPEPVEGFYVAILVDAEIGLVLGEEDVVKKFKTRTLLAKVSLLSRREHCSGNAVYATKAQFCDSGTWHDILIRCSGENEGLKAPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPASGYAVFMFRTRSGLDSRLWLEEKIAQKDKDRVEFSLLIYACKTT 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00559 300 PANTHER EXPRESSED PROTEIN 6 298 IPR008586 -
Vian11g00559 300 Pfam Plant protein of unknown function (DUF868) 38 298 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00559 Vian-Chr11 5624570 5625472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00559 3 299 EF-hand Containing Proteins AT5G28150 38.944 4.84e-60 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00559 - - gmx:100798692 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00559 11 5624570 5625472 Vian11g00559 11 5624570 5625472 ECH
Vian11g00559 11 5624570 5625472 Vian5g01075 5 32533923 32534885 PCT