Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01068 ATGACCCCAAAGCTGTGTCCTTCATGCACAATGACAATTACACCAGACAACTTTTACTGTGCAAATATGGAGAAGAAGTTGCACCATGCTATGGGATCTTTTAATCACTATGTGATTGTTAAGTTTAAGGATGGTGTGGAAGTTGAAGAACTCATTCAAGGGTTGGAGAAGATGGCATCTGAAATTGATCAAGTCAAATCCTTTGAATGGGGAAAGGACATAGAAAGCCATGAAATGCTAAGACAAGGTTTCACTCATGTTTTCTTGATGGCATTCAATGGAAAAGAGGAGTTCAATGCATTTCAGACTCATCCCAATCATGTTGAGTTCTCAGGAGTGTTTTCACCAGCTATTGAGAAGATTGTGGTGCTGGATTTTCCATCTAAGCTTGTCAAAGCACCAGCATGA 408 0.3995 MTPKLCPSCTMTITPDNFYCANMEKKLHHAMGSFNHYVIVKFKDGVEVEELIQGLEKMASEIDQVKSFEWGKDIESHEMLRQGFTHVFLMAFNGKEEFNAFQTHPNHVEFSGVFSPAIEKIVVLDFPSKLVKAPA 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01068 135 SMART Dabb_2 34 128 IPR013097 -
Vian5g01068 135 PANTHER - 31 129 IPR044662 -
Vian5g01068 135 Pfam Stress responsive A/B Barrel Domain 35 127 IPR013097 -
Vian5g01068 135 Gene3D - 30 135 - -
Vian5g01068 135 ProSiteProfiles Stress-response A/B barrel domain profile. 34 126 IPR013097 -
Vian5g01068 135 SUPERFAMILY Dimeric alpha+beta barrel 31 127 IPR011008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01068 Vian-Chr5 32440250 32441359 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01068 - - vra:106755810 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00562 11 5670815 5671475 Vian5g01068 5 32440250 32441359 PCT