Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01041 ATGGTTTCAAGAGGAGCAAAAGTGTTACTCATAGGTCTTCTGGGAATGTTTTGCCAGGGTACTCAACTCCCTCCTCCCAAACCCAATGATTCTGCAGATGGTGTTCATGTTTCACCAAAAGTCAGACTCAGAGATGGAAGGTACCTTGCTTATAGAGAAAAGGGTGTCCCCAAGGACCAAGCAAAACACATCATCATCATTGTACACGGCTTCGGAAGCTCCAAAGATATGAACTTTTTGGCACCCCAAGAACTGATAGATGAACTGGGTATATATATTCTGCAATATGACAGAGCAGGGTATGGAGAAAGTGATCCAAACCCCAAACGCTCACTGAAAAGTGAAGCACTTGACATTGAAGAGCTGGCTGATCAGTTACAGATAGGATCAAAATTTTATGTGATTGGAGTCTCTATGGGGTCATATGCTACCTGGAGTTGTTTGAACTACATCCCCAACAGGCTAGCAGGTGTAGCTATGATAGCCCCAGTGATAAACTATCAATGGCCTTCGTTTCCTGAGAGTCTGATAAAAAAGGACTATAAGAGGAAACTCATCAAGTGTGCCGTGTTGCTTGCAAAGTATTTTCCAAGACTTTTGCTCTGGTGGGTGACTCACAAGTGGCTCCCTTCAAATTCTGTCATAGAAAAAAACCCAGCTTTTTTCAACAAAAGAGATATAGATATCTTAGAAACTATTCCTGGGTTTCCAATGCTTAGCAAGGAAAAATTAAGGGAACAAGTTGTTTTTGACACTCTGAGGGATGATTGGTTGGTGGCCTTTGGGGAGTGGGAATTTGACCCTTTGAAGCTAAGTAATCCATTTCCTCATAACACAAGTTCAGCTCACATTTGGCAGGGCTATGAAGATAAGGTAGTGCCCTCTCAAATTCAAAGGTTTGTTACAGAGAAGCTGCCTTGGATACAGTATCATGAAGTTCCAGATGGTGGTCATTTGATTGTGCACTATAGTGGGGTATGTGAGGCCATTCTGAAGGCACTTTTACTTGGAGAACAAAATCTTTTATATAGGCCTAGATCAGGAGTATCTGTATCTTGA 1059 0.4202 MVSRGAKVLLIGLLGMFCQGTQLPPPKPNDSADGVHVSPKVRLRDGRYLAYREKGVPKDQAKHIIIIVHGFGSSKDMNFLAPQELIDELGIYILQYDRAGYGESDPNPKRSLKSEALDIEELADQLQIGSKFYVIGVSMGSYATWSCLNYIPNRLAGVAMIAPVINYQWPSFPESLIKKDYKRKLIKCAVLLAKYFPRLLLWWVTHKWLPSNSVIEKNPAFFNKRDIDILETIPGFPMLSKEKLREQVVFDTLRDDWLVAFGEWEFDPLKLSNPFPHNTSSAHIWQGYEDKVVPSQIQRFVTEKLPWIQYHEVPDGGHLIVHYSGVCEAILKALLLGEQNLLYRPRSGVSVS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01041 352 Pfam Alpha/beta hydrolase family 65 321 IPR000073 -
Vian5g01041 352 FunFam Alpha/beta-Hydrolases superfamily protein 35 335 - -
Vian5g01041 352 Gene3D alpha/beta hydrolase 41 334 IPR029058 -
Vian5g01041 352 SUPERFAMILY alpha/beta-Hydrolases 40 321 IPR029058 -
Vian5g01041 352 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 9 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01041 Vian-Chr5 32056624 32058734 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01041 - - gmx:100803294 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00580 11 5926550 5927940 Vian5g01041 5 32056624 32058734 ECH
Vian5g01041 5 32056624 32058734 Vian5g01041 5 32056624 32058734 ECH
Vian11g00580 11 5926550 5927940 Vian5g01041 5 32056624 32058734 PCT