Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00580 ATGGTGATTCCAATAGCAGTGGCACTGGTGGTGATTCTCATTGGGTTGGTTTATCAGGCCATAAAACCCCCAGTTCCTAAAATCTGTGGATCCATTGGTGGTCCTCAAGTTACTTCACCCAGAGTGAAGCTCAGTGATGGGAGGAATTTGGCCTACCGAGAATTTGGTGTTCCTAAGGAAGAAGCTAGGTACAAGATCATTGTCATTCATGGATATAACAGTTTCAAAGACACAACTTTACCAGTTTCTCAAGAACTTATTGAGGAGCTTGGGATATATTTCCTCCACTTCGACAGGGCTGGTTATGGTGAAAGTGACCCACATTCATCACGTTCTGTGAAGAGTGAAGCTTATGATATTCAAGAACTGGCTGATAAACTGGAGATTGGTGATAAGTTTTATATAATAGGAATGTCAATGGGAGGAGCAGCTTTGGTGGCTCCATTTATAAGCTATTGGTGGCCTTCTTTTCCTGATCATCTTTTGAGAGAGGCATTTCAGATGCTACCTCGGTCAGACCAATGGACTTTTCGAGTCGCACATTACGCCCCTTGGTTGTTCCATTGGTGGATGACACAAAAATGTTTTCCTTCATTGACCTTAACAAACATGTTGTCTCCTGATGATATAGAAATAGTGAGGACCTTGTCAGAACTCCCAAACACTGGTCAGGAGAAGATAACTCAGCAAGGTGAATATGAATCATTACACCGAGACATAATGAGTGCTTTTGGAAAGTGGGAATTTGGCCCCACAGAGATAGAAAATCCTTTCTTTGATGATAATGGTTCAGTCCACATATGGCAAGGCTTTGAAGATAGGATCATTCCCTACACACTGAACCGTTACATCTCTCAAAAATTACCATGGATTCTTTATCACGAGCTTCCTCATGCGGGACATTTGTTTCTCTTCAAGAAAAATGAATGTGAGTCTATTATAAGAGCACTTGTACTCTCACCAGATATTTCTGAATAA 978 0.4131 MVIPIAVALVVILIGLVYQAIKPPVPKICGSIGGPQVTSPRVKLSDGRNLAYREFGVPKEEARYKIIVIHGYNSFKDTTLPVSQELIEELGIYFLHFDRAGYGESDPHSSRSVKSEAYDIQELADKLEIGDKFYIIGMSMGGAALVAPFISYWWPSFPDHLLREAFQMLPRSDQWTFRVAHYAPWLFHWWMTQKCFPSLTLTNMLSPDDIEIVRTLSELPNTGQEKITQQGEYESLHRDIMSAFGKWEFGPTEIENPFFDDNGSVHIWQGFEDRIIPYTLNRYISQKLPWILYHELPHAGHLFLFKKNECESIIRALVLSPDISE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00580 325 Pfam Alpha/beta hydrolase family 66 305 IPR000073 -
Vian11g00580 325 Gene3D alpha/beta hydrolase 33 317 IPR029058 -
Vian11g00580 325 FunFam Alpha/beta-Hydrolases superfamily protein 36 318 - -
Vian11g00580 325 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 6 319 - -
Vian11g00580 325 SUPERFAMILY alpha/beta-Hydrolases 35 307 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00580 Vian-Chr11 5926550 5927940 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00580 - - vra:106758725 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00580 11 5926550 5927940 Vian11g00580 11 5926550 5927940 ECH
Vian11g00580 11 5926550 5927940 Vian5g01041 5 32056624 32058734 ECH
Vian11g00580 11 5926550 5927940 Vian5g01041 5 32056624 32058734 PCT