Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01007 ATGTCCGATACTACTTCGCCACCGTCGGAAAAAACCCAAAACACTTCAATCCTCGCCGCGCTCCACTCCGACATCATCCACGCGCACATCCTCAAGCGCCTCGACGCCGCCACGCTGGCATCCGCTGCGTCCGTATCCTCCCTCATGCACCGCCTCTGCACACAAGAGGATCTCTGGCGCCAAATCTGCACCGCCACGTGGCCGTCCTTGCGCGACCCCATCGCCCGTCGCGTCGTCTCCACCATCCCCGGCGGTCACCGCTCCATCTACTCAGACGCCTTCCCTTCCCTCCATCATTTCTCTCTGCATTCCGTCCGCCCGCCGCCTCCACCGCCGGAGGAGCTTATCTCCGCCGTGGACATATACTACGAGGGAAGGCCGGTGTTCTCGCGGGTAAAACGCATCGAAACGCAGAAAGACTGGTTCCTCTCCTCGCCGCTGTGGGTGGACGCTCTCGAGCCTAACGAGATGATTCCCACGACGTTGAAGTTCACGAGGAAGGAAGAGAAGTGGTTGAAGCAGTTGGAGGAGAGTCTGAGCGTGAGCTGGATTATGGTGGATCCTACAGGGAAGCGTGCGGCGAACGTTTCGAGCCGGAGGGCGGTATTGGCGCGGCGGCACTGGCTGACACGGGAGGTGGAGGTGTTGTACGCAGCGGAGATGGCGAGGGAAAGGGTGCAGTGCGTGGTGAAGATCACGTGCGGCGGGAAGGTGGGAGGGGAAGTGCACGTGAGGGAGGTGAATCTGGTTATGGAGGACACGGAGGGGCGGCAGCTGAGTGGGAAGGAGGGTGTGGCGATTCTGCAGAGAGGGATGGAGTGTGGAGTGAGGAAGAGAGTGGATGCTGTGAGGGAGAAGGAGAGGTTTCAGAAGTTCACGTGCTTGATGAAGGAGAGCAGAGAAAGGAAGTTTAGGTGGGAGAAGGCACGTGATCTTCTTTCAACACTCTTCGCTTTGCTTGCTTGTCTCTTCTTTTGCTTTCTCGCTGGATTTTGA 996 0.5884 MSDTTSPPSEKTQNTSILAALHSDIIHAHILKRLDAATLASAASVSSLMHRLCTQEDLWRQICTATWPSLRDPIARRVVSTIPGGHRSIYSDAFPSLHHFSLHSVRPPPPPPEELISAVDIYYEGRPVFSRVKRIETQKDWFLSSPLWVDALEPNEMIPTTLKFTRKEEKWLKQLEESLSVSWIMVDPTGKRAANVSSRRAVLARRHWLTREVEVLYAAEMARERVQCVVKITCGGKVGGEVHVREVNLVMEDTEGRQLSGKEGVAILQRGMECGVRKRVDAVREKERFQKFTCLMKESRERKFRWEKARDLLSTLFALLACLFFCFLAGF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01007 331 PANTHER F-BOX PROTEIN-RELATED 12 327 IPR045283 -
Vian5g01007 331 SUPERFAMILY F-box domain 9 86 IPR036047 GO:0005515
Vian5g01007 331 Gene3D - 5 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01007 Vian-Chr5 31565255 31568277 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01007 - - ccaj:109798917 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00605 11 6154388 6155377 Vian5g01007 5 31565255 31568277 PCT