Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00605 ATGCCATCCATGGACGCCGCTTCTTCTTTTTCTTCTTCTGACATCACCGCTCTCCACCCCGACATCATTCGATCCCACATCCTTAATCGCCTCGACGGCCCCACCCTCGCCTCCGCATCCTCCGCCACCCTCCACCTCCGCCGTCTCTGCACCGATCACAACCTCTGGCGGACCATCTGCGCCGCCTCCTGGCCCTCTCTCAACCAACCCCACGCCTCTTCCCTCATCGATACCTTCCCCGCTGCCCACCGCTCTGTCTTTTCCGACTCTTTTCCCTCCATCCAATACTCCCCTCCTCCCCACCCCAACCCGCCGCAGTTGCCGCCGGAGTTTGTATCCGCCGTGGACCTCTACTACAAGGGCAGACCCGTCTTTTCGCGTGTCATCACGACCGAAACCCACAAGGGTTGGTTCCTCTCCTCCCCGCTCTGGGTGGAGCTCCTCGACCCCAACGAGGTGGTCCCCACTCCCTTGATATTCGCGAAGTGCGATGAGGAATCTTCGTGGCTGGCACACCTGGAGGAGAATCTGGGGCTGAGCTGGATCGTCATCGACCCGACGCGGAAGCGTGCGGTGAACCTCTCGAGCCGGCGGCCGGTGGCGGCGCGGCGGCACTGGCTGACGGGGGATCTGGAGGTTATTTTCGCGGTGACCATGGAGACGGTCCAGTGGGTTATCAGGGTCACGTGCTGCGGGAAGGCCGGAGGCGCTATGCACGTGAGGGAGGCGAGTCTGACGATGGAGGACACGGAAGGGAGACACGTGACCGGCAGGGACAGCTTCGTGATTTTGCAAGACGCCATGGAGAACGGCGAGCGACGAAAACCCGATCCTGAAGAAGCCAAAGCAAGGTTCGATAAATTTTGCCGCTTGAAGAGAGAGATCAGAGAGAGAAAACTACGGAGAGACAGTGTAATGGACACGGTTGCCATGTTGGTCTCTTTCACCATTTTCGTTTCCCTCTTTTGGTTCATGGTCTTTGGTTTTTGA 990 0.5919 MPSMDAASSFSSSDITALHPDIIRSHILNRLDGPTLASASSATLHLRRLCTDHNLWRTICAASWPSLNQPHASSLIDTFPAAHRSVFSDSFPSIQYSPPPHPNPPQLPPEFVSAVDLYYKGRPVFSRVITTETHKGWFLSSPLWVELLDPNEVVPTPLIFAKCDEESSWLAHLEENLGLSWIVIDPTRKRAVNLSSRRPVAARRHWLTGDLEVIFAVTMETVQWVIRVTCCGKAGGAMHVREASLTMEDTEGRHVTGRDSFVILQDAMENGERRKPDPEEAKARFDKFCRLKREIRERKLRRDSVMDTVAMLVSFTIFVSLFWFMVFGF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00605 329 SUPERFAMILY F-box domain 12 80 IPR036047 GO:0005515
Vian11g00605 329 Gene3D - 4 91 - -
Vian11g00605 329 PANTHER F-BOX PROTEIN-RELATED 11 323 IPR045283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00605 Vian-Chr11 6154388 6155377 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00605 - - gmx:100794825 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00605 11 6154388 6155377 Vian11g00605 11 6154388 6155377 ECH
Vian11g00605 11 6154388 6155377 Vian5g01007 5 31565255 31568277 PCT