Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00964 ATGGAGTTTCACTCTCTTCCCAAACTCTACCTTCTCTTTTCCTTATCCATTATCTTCCTTTCACCCTTTCAAGCACAAGCTGCAACTCAAATCTCTTACTGCGATAAGAAGGCAAACTATCCTGTGAAGGTGACTGGAGTTGATATATCACCAGACCCTGTGAAGAGTGGCCATCCGGCTACCTTTAAGATCTATGCTACTTCAGGTAAATCTATCCTTGGTGGAGAGGTAGTAATTGGAGTTTCATACGTTGGGGTGCCTGTCCATACAGAAAACATTGATCTTTGTAAAGAAGTAAAGTGCCCTGTTTCTAATGGCAATTTTGTGATTTCACATACCCAAACATTGCCTGCAATTACTCCACCGGGACCTTACTCTCTGAAGATGACACTGAAGAATGATCGGGACGAGTTGTTAACTTGCATTAAGTTTAATTTTAAGATCGTTCTTGGATCTTTGGTGTCTGATATATGA 474 0.4093 MEFHSLPKLYLLFSLSIIFLSPFQAQAATQISYCDKKANYPVKVTGVDISPDPVKSGHPATFKIYATSGKSILGGEVVIGVSYVGVPVHTENIDLCKEVKCPVSNGNFVISHTQTLPAITPPGPYSLKMTLKNDRDELLTCIKFNFKIVLGSLVSDI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00964 157 Pfam ML domain 29 148 IPR003172 -
Vian5g00964 157 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 8 149 IPR039670 GO:0015918|GO:0032934
Vian5g00964 157 CDD PG-PI_TP 31 146 IPR033917 GO:0032366
Vian5g00964 157 FunFam putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 29 150 - -
Vian5g00964 157 SUPERFAMILY E set domains 28 149 IPR014756 -
Vian5g00964 157 SMART pgtp_13 31 146 IPR003172 -
Vian5g00964 157 Gene3D - 28 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00964 Vian-Chr5 30935944 30940961 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00964 - - pvu:PHAVU_011G100100g 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00647 11 6693306 6695499 Vian5g00964 5 30935944 30940961 PCT